Detailed information NTG0841675

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QMC72_RS07700
• Genome accession: NZ_CP127095
• Coordinates: 1429560..1430705 (-)
• Length: 381 a.a.
• NCBI ID: WP_232919982.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain LBA001
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1424560..1435705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMC72_RS07675 (QMC72_07675)	-	1424810..1426885 (-)	2076	WP_284107243.1	transglycosylase domain-containing protein	-
QMC72_RS07680 (QMC72_07680)	speE	1427087..1427917 (+)	831	WP_003227543.1	spermidine synthase	-
QMC72_RS07685 (QMC72_07685)	speB	1427978..1428850 (+)	873	WP_119914420.1	agmatinase	-
QMC72_RS07690 (QMC72_07690)	-	1428886..1429359 (-)	474	Protein_1515	YbaK/EbsC family protein	-
QMC72_RS07695 (QMC72_07695)	phrF	1429457..1429576 (-)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
QMC72_RS07700 (QMC72_07700)	rapF	1429560..1430705 (-)	1146	WP_232919982.1	response regulator aspartate phosphatase RapF	Regulator
QMC72_RS07705 (QMC72_07705)	-	1430935..1432290 (+)	1356	WP_232919983.1	YncE family protein	-
QMC72_RS07710 (QMC72_07710)	-	1432330..1433706 (+)	1377	WP_232919984.1	YncE family protein	-
QMC72_RS07715 (QMC72_07715)	-	1433713..1434414 (-)	702	WP_133485615.1	bacteriocin biosynthesis protein AlbG	-
QMC72_RS07720 (QMC72_07720)	-	1434411..1435691 (-)	1281	WP_232919985.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45665.06 Da
• Isoelectric Point: 5.1503

>NTDB_id=841675 QMC72_RS07700 WP_232919982.1 1429560..1430705(-) (rapF) [Bacillus inaquosorum strain LBA001]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIRQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNIIPSLPQAYFLITQIHYKMGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QSFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=841675 QMC72_RS07700 WP_232919982.1 1429560..1430705(-) (rapF) [Bacillus inaquosorum strain LBA001]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGAAGAGAAATCAGGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGCTAGAAAAAATGCGGATCGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGGCTGCTTGAGTACTACTTTAATTTCTTCAG
AGGCATGTATGAACTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTCG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAAATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGCCACTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGATGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCTAATATTATTCCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAAATGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGTTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.063	100	0.961
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572