Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLC_RS09300 Genome accession   NZ_AP024222
Coordinates   1835469..1836755 (+) Length   428 a.a.
NCBI ID   WP_126354650.1    Uniprot ID   A0AAD1K009
Organism   Lactococcus cremoris strain EPSC     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1830469..1841755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLC_RS09275 (LLC_19120) rlmH 1831941..1832420 (+) 480 WP_021164969.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LLC_RS09280 (LLC_19130) - 1832438..1833136 (+) 699 Protein_1831 DNA alkylation repair protein -
  LLC_RS09285 (LLC_19140) yajC 1833231..1833563 (+) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLC_RS09290 (LLC_19150) - 1833913..1834647 (+) 735 WP_126354648.1 isoprenyl transferase -
  LLC_RS09295 (LLC_19160) - 1834647..1835450 (+) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLC_RS09300 (LLC_19170) eeP 1835469..1836755 (+) 1287 WP_126354650.1 RIP metalloprotease RseP Regulator
  LLC_RS09305 (LLC_19180) - 1836825..1838675 (+) 1851 WP_126354652.1 proline--tRNA ligase -
  LLC_RS09310 (LLC_19190) - 1838691..1840022 (+) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLC_RS14265 (LLC_19200) - 1840292..1840483 (+) 192 WP_021211222.1 hypothetical protein -
  LLC_RS14580 - 1840657..1841250 (+) 594 Protein_1839 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46489.07 Da        Isoelectric Point: 6.5140

>NTDB_id=84140 LLC_RS09300 WP_126354650.1 1835469..1836755(+) (eeP) [Lactococcus cremoris strain EPSC]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEETVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEMSSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=84140 LLC_RS09300 WP_126354650.1 1835469..1836755(+) (eeP) [Lactococcus cremoris strain EPSC]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAACTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATGTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTACTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(7-413)

(217-279)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.684

100

0.561

  eeP Streptococcus thermophilus LMD-9

55.452

100

0.558


Multiple sequence alignment