Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | LLC_RS09205 | Genome accession | NZ_AP024222 |
| Coordinates | 1814753..1815244 (+) | Length | 163 a.a. |
| NCBI ID | WP_015082943.1 | Uniprot ID | A0A166XX03 |
| Organism | Lactococcus cremoris strain EPSC | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1809753..1820244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLC_RS09190 (LLC_18980) | rpsB | 1810636..1811403 (+) | 768 | WP_011836067.1 | 30S ribosomal protein S2 | - |
| LLC_RS09195 (LLC_18990) | tsf | 1811525..1812553 (+) | 1029 | WP_011677206.1 | translation elongation factor Ts | - |
| LLC_RS09200 (LLC_19000) | ezrA | 1812758..1814488 (+) | 1731 | WP_061778312.1 | septation ring formation regulator EzrA | - |
| LLC_RS09205 (LLC_19010) | comX | 1814753..1815244 (+) | 492 | WP_015082943.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 19661.45 Da Isoelectric Point: 6.0256
>NTDB_id=84138 LLC_RS09205 WP_015082943.1 1814753..1815244(+) (comX) [Lactococcus cremoris strain EPSC]
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
Nucleotide
Download Length: 492 bp
>NTDB_id=84138 LLC_RS09205 WP_015082943.1 1814753..1815244(+) (comX) [Lactococcus cremoris strain EPSC]
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Lactococcus lactis subsp. cremoris KW2 |
98.773 |
100 |
0.988 |
| comX | Lactococcus lactis subsp. lactis strain DGCC12653 |
75.46 |
100 |
0.755 |