Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | JG741_RS09215 | Genome accession | NZ_AP024210 |
| Coordinates | 1814766..1815257 (+) | Length | 163 a.a. |
| NCBI ID | WP_015082943.1 | Uniprot ID | A0A166XX03 |
| Organism | Lactococcus cremoris strain G3-2 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1809766..1820257
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG741_RS09200 (LLG32_19000) | rpsB | 1810649..1811416 (+) | 768 | WP_011836067.1 | 30S ribosomal protein S2 | - |
| JG741_RS09205 (LLG32_19010) | tsf | 1811538..1812566 (+) | 1029 | WP_011677206.1 | translation elongation factor Ts | - |
| JG741_RS09210 (LLG32_19020) | ezrA | 1812771..1814501 (+) | 1731 | WP_061778312.1 | septation ring formation regulator EzrA | - |
| JG741_RS09215 (LLG32_19030) | comX | 1814766..1815257 (+) | 492 | WP_015082943.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 19661.45 Da Isoelectric Point: 6.0256
>NTDB_id=84091 JG741_RS09215 WP_015082943.1 1814766..1815257(+) (comX) [Lactococcus cremoris strain G3-2]
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
MTYYLEENEFEGLFSGMKPIIRKLMKQIRIKAWDIEDYYQEGMIILHHLLEENHPSTNIYTKFKVKYHQRLIDELRHSYA
KKRLHDHFVGLDIYECSDWIDAGGSTPESELVFNHLLAEVYEGLSAHYQELLVRQMRGEELTRMECYRLREKIKNILFSR
DDD
Nucleotide
Download Length: 492 bp
>NTDB_id=84091 JG741_RS09215 WP_015082943.1 1814766..1815257(+) (comX) [Lactococcus cremoris strain G3-2]
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
ATGACATATTACTTGGAAGAAAATGAATTCGAAGGTTTATTTTCTGGAATGAAACCAATCATCAGAAAATTGATGAAACA
AATTCGAATCAAAGCATGGGACATAGAGGATTATTATCAAGAAGGAATGATTATTTTGCATCACCTTTTAGAAGAAAATC
ACCCATCCACTAATATTTATACAAAGTTCAAAGTAAAATATCATCAACGTTTGATTGATGAACTACGCCATAGCTACGCC
AAAAAACGGCTTCATGACCATTTTGTAGGTCTAGACATTTATGAATGTTCGGACTGGATAGATGCAGGAGGAAGTACCCC
TGAAAGCGAGCTTGTGTTCAACCATCTTTTAGCAGAAGTTTATGAAGGATTGAGCGCCCACTATCAGGAATTACTCGTGC
GTCAAATGAGAGGAGAAGAACTCACGCGAATGGAATGCTATCGGCTACGAGAAAAAATCAAAAATATACTATTTTCTCGA
GATGATGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Lactococcus lactis subsp. cremoris KW2 |
98.773 |
100 |
0.988 |
| comX | Lactococcus lactis subsp. lactis strain DGCC12653 |
75.46 |
100 |
0.755 |