Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | JN167_RS10050 | Genome accession | NZ_AP024201 |
| Coordinates | 2098431..2098826 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932697.1 | Uniprot ID | A0A7U7PX14 |
| Organism | Staphylococcus argenteus strain Tokyo13069 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2093431..2103826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN167_RS10025 (TMSFP069_19270) | thiE | 2094035..2094676 (-) | 642 | WP_047528485.1 | thiamine phosphate synthase | - |
| JN167_RS10030 (TMSFP069_19280) | thiM | 2094678..2095469 (-) | 792 | WP_072292204.1 | hydroxyethylthiazole kinase | - |
| JN167_RS10035 (TMSFP069_19290) | thiD | 2095453..2096283 (-) | 831 | WP_001039676.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| JN167_RS10040 (TMSFP069_19300) | tenA | 2096280..2096966 (-) | 687 | WP_047437277.1 | thiaminase II | - |
| JN167_RS10045 (TMSFP069_19310) | sceD | 2097347..2098039 (-) | 693 | WP_031787703.1 | lytic transglycosylase SceD | - |
| JN167_RS10050 (TMSFP069_19320) | ssb | 2098431..2098826 (-) | 396 | WP_000932697.1 | single-stranded DNA-binding protein | Machinery gene |
| JN167_RS10055 (TMSFP069_19330) | - | 2099020..2099460 (+) | 441 | WP_000846749.1 | YwpF-like family protein | - |
| JN167_RS10060 (TMSFP069_19340) | fabZ | 2099517..2099957 (-) | 441 | WP_000447680.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| JN167_RS10065 (TMSFP069_19350) | murA | 2099991..2101256 (-) | 1266 | WP_000358013.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| JN167_RS10070 (TMSFP069_19360) | - | 2101368..2101601 (-) | 234 | WP_000384521.1 | DUF1146 family protein | - |
| JN167_RS10075 (TMSFP069_19370) | - | 2101933..2102337 (-) | 405 | WP_001094393.1 | F0F1 ATP synthase subunit epsilon | - |
| JN167_RS10080 (TMSFP069_19380) | atpD | 2102357..2103769 (-) | 1413 | WP_000511140.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15016.10 Da Isoelectric Point: 5.2398
>NTDB_id=83987 JN167_RS10050 WP_000932697.1 2098431..2098826(-) (ssb) [Staphylococcus argenteus strain Tokyo13069]
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=83987 JN167_RS10050 WP_000932697.1 2098431..2098826(-) (ssb) [Staphylococcus argenteus strain Tokyo13069]
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
93.893 |
100 |
0.939 |
| ssb | Staphylococcus aureus MW2 |
93.13 |
100 |
0.931 |