Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | JN167_RS07205 | Genome accession | NZ_AP024201 |
| Coordinates | 1556668..1556967 (-) | Length | 99 a.a. |
| NCBI ID | WP_000800819.1 | Uniprot ID | - |
| Organism | Staphylococcus argenteus strain Tokyo13069 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1551668..1561967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN167_RS07180 (TMSFP069_14010) | gcvPA | 1552881..1554227 (-) | 1347 | WP_202257174.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| JN167_RS07185 (TMSFP069_14020) | gcvT | 1554246..1555337 (-) | 1092 | WP_047526706.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| JN167_RS07190 (TMSFP069_14030) | - | 1555494..1556018 (-) | 525 | WP_047526708.1 | shikimate kinase | - |
| JN167_RS07195 (TMSFP069_14040) | - | 1556005..1556154 (-) | 150 | WP_072292059.1 | hypothetical protein | - |
| JN167_RS07200 (TMSFP069_14050) | comGF | 1556253..1556750 (-) | 498 | WP_072292021.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JN167_RS07205 (TMSFP069_14060) | comGE | 1556668..1556967 (-) | 300 | WP_000800819.1 | hypothetical protein | Machinery gene |
| JN167_RS07210 (TMSFP069_14070) | comGD | 1556954..1557400 (-) | 447 | WP_072292023.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| JN167_RS07215 (TMSFP069_14080) | comGC | 1557378..1557689 (-) | 312 | WP_000921699.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JN167_RS07220 (TMSFP069_14090) | comGB | 1557704..1558774 (-) | 1071 | WP_047434565.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JN167_RS07225 (TMSFP069_14100) | comGA | 1558746..1559720 (-) | 975 | WP_031787262.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JN167_RS07230 (TMSFP069_14110) | - | 1559772..1560395 (-) | 624 | WP_001222932.1 | MBL fold metallo-hydrolase | - |
| JN167_RS07235 (TMSFP069_14120) | - | 1560392..1560721 (-) | 330 | WP_001018874.1 | MTH1187 family thiamine-binding protein | - |
| JN167_RS07240 (TMSFP069_14130) | - | 1560721..1561707 (-) | 987 | WP_000161316.1 | ROK family glucokinase | - |
| JN167_RS07245 (TMSFP069_14140) | - | 1561707..1561907 (-) | 201 | WP_000087563.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11194.39 Da Isoelectric Point: 9.4577
>NTDB_id=83969 JN167_RS07205 WP_000800819.1 1556668..1556967(-) (comGE) [Staphylococcus argenteus strain Tokyo13069]
MKNYKLKASFFLDSMAAVMLVGLICLVLIPMMNQMRMNFYIEVKSIDAAKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
MKNYKLKASFFLDSMAAVMLVGLICLVLIPMMNQMRMNFYIEVKSIDAAKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=83969 JN167_RS07205 WP_000800819.1 1556668..1556967(-) (comGE) [Staphylococcus argenteus strain Tokyo13069]
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATGATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCAGCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTAAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATGATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCAGCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTAAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
57.576 |
100 |
0.576 |
| comGE | Staphylococcus aureus MW2 |
49.123 |
100 |
0.566 |