Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | JN157_RS10055 | Genome accession | NZ_AP024200 |
| Coordinates | 2098429..2098824 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932697.1 | Uniprot ID | A0A7U7PX14 |
| Organism | Staphylococcus argenteus strain Tokyo13064 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2093429..2103824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN157_RS10030 (TMSFP064_19240) | thiE | 2094033..2094674 (-) | 642 | WP_047528485.1 | thiamine phosphate synthase | - |
| JN157_RS10035 (TMSFP064_19250) | thiM | 2094676..2095467 (-) | 792 | WP_072292204.1 | hydroxyethylthiazole kinase | - |
| JN157_RS10040 (TMSFP064_19260) | thiD | 2095451..2096281 (-) | 831 | WP_001039676.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| JN157_RS10045 (TMSFP064_19270) | tenA | 2096278..2096964 (-) | 687 | WP_047437277.1 | thiaminase II | - |
| JN157_RS10050 (TMSFP064_19280) | sceD | 2097345..2098037 (-) | 693 | WP_031787703.1 | lytic transglycosylase SceD | - |
| JN157_RS10055 (TMSFP064_19290) | ssb | 2098429..2098824 (-) | 396 | WP_000932697.1 | single-stranded DNA-binding protein | Machinery gene |
| JN157_RS10060 (TMSFP064_19300) | - | 2099018..2099458 (+) | 441 | WP_000846749.1 | YwpF-like family protein | - |
| JN157_RS10065 (TMSFP064_19310) | fabZ | 2099515..2099955 (-) | 441 | WP_000447680.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| JN157_RS10070 (TMSFP064_19320) | murA | 2099989..2101254 (-) | 1266 | WP_000358013.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| JN157_RS10075 (TMSFP064_19330) | - | 2101366..2101599 (-) | 234 | WP_000384521.1 | DUF1146 family protein | - |
| JN157_RS10080 (TMSFP064_19340) | - | 2101931..2102335 (-) | 405 | WP_001094393.1 | F0F1 ATP synthase subunit epsilon | - |
| JN157_RS10085 (TMSFP064_19350) | atpD | 2102355..2103767 (-) | 1413 | WP_000511140.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15016.10 Da Isoelectric Point: 5.2398
>NTDB_id=83946 JN157_RS10055 WP_000932697.1 2098429..2098824(-) (ssb) [Staphylococcus argenteus strain Tokyo13064]
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSHNIDNPDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=83946 JN157_RS10055 WP_000932697.1 2098429..2098824(-) (ssb) [Staphylococcus argenteus strain Tokyo13064]
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
ATGCTAAACAAAATCGTAATAGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGTGTTGCAACACAACGAAATTATAAAGATGAAAACGGAGAAATCGTTTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGCTAGCGTCAAACATTGATAAGTACACCAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACACACTTTGTTACAGAATTATATGTTGAAACTATAAAATTCATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCATAATATAGATAATCCTGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
93.893 |
100 |
0.939 |
| ssb | Staphylococcus aureus MW2 |
93.13 |
100 |
0.931 |