Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LLE01_RS05315 Genome accession   NZ_CP126675
Coordinates   826663..827364 (+) Length   233 a.a.
NCBI ID   WP_260307418.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain E.0.1     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 821663..832364
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLE01_RS05300 (LLE01_05285) - 824057..824965 (+) 909 WP_003130548.1 diacylglycerol kinase family protein -
  LLE01_RS05305 (LLE01_05290) - 825113..825799 (+) 687 WP_260307419.1 amino acid ABC transporter permease -
  LLE01_RS05310 (LLE01_05295) - 825799..826533 (+) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  LLE01_RS05315 (LLE01_05300) mecA 826663..827364 (+) 702 WP_260307418.1 adaptor protein MecA Regulator
  LLE01_RS05320 (LLE01_05305) - 827367..828698 (+) 1332 WP_010906141.1 glycosyltransferase family 4 protein -
  LLE01_RS05325 (LLE01_05310) sufC 828873..829643 (+) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  LLE01_RS05330 (LLE01_05315) sufD 829778..831037 (+) 1260 WP_370566514.1 Fe-S cluster assembly protein SufD -
  LLE01_RS05335 (LLE01_05320) - 831037..832254 (+) 1218 WP_004255189.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27078.40 Da        Isoelectric Point: 4.0719

>NTDB_id=839360 LLE01_RS05315 WP_260307418.1 826663..827364(+) (mecA) [Lactococcus lactis subsp. lactis strain E.0.1]
MEYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=839360 LLE01_RS05315 WP_260307418.1 826663..827364(+) (mecA) [Lactococcus lactis subsp. lactis strain E.0.1]
ATGGAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTCGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966