Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   QPR37_RS11990 Genome accession   NZ_CP126631
Coordinates   2437533..2438519 (-) Length   328 a.a.
NCBI ID   WP_141060043.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 33-40     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 2432533..2443519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR37_RS11965 (QPR37_11965) - 2432794..2433141 (-) 348 WP_001242107.1 hypothetical protein -
  QPR37_RS11970 (QPR37_11970) - 2433327..2433920 (+) 594 WP_063651480.1 CYTH domain-containing protein -
  QPR37_RS11975 (QPR37_11975) - 2434024..2434389 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  QPR37_RS11980 (QPR37_11980) yjbH 2434412..2435218 (+) 807 WP_031795069.1 protease adaptor protein YjbH -
  QPR37_RS11985 (QPR37_11985) pepF 2435677..2437485 (-) 1809 WP_285146958.1 oligoendopeptidase F -
  QPR37_RS11990 (QPR37_11990) coiA 2437533..2438519 (-) 987 WP_141060043.1 competence protein CoiA family protein Machinery gene
  QPR37_RS11995 (QPR37_11995) mecA 2438640..2439359 (-) 720 WP_001217728.1 adaptor protein MecA -
  QPR37_RS12000 (QPR37_12000) spxA 2439730..2440125 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  QPR37_RS12005 (QPR37_12005) trpS 2440420..2441409 (+) 990 WP_063651475.1 tryptophan--tRNA ligase -
  QPR37_RS12010 (QPR37_12010) opp4C 2441451..2442332 (-) 882 WP_285146959.1 oligopeptide ABC transporter permease -
  QPR37_RS12015 (QPR37_12015) opp4B 2442344..2443306 (-) 963 WP_000593417.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38621.17 Da        Isoelectric Point: 9.6530

>NTDB_id=839342 QPR37_RS11990 WP_141060043.1 2437533..2438519(-) (coiA) [Staphylococcus aureus strain 33-40]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=839342 QPR37_RS11990 WP_141060043.1 2437533..2438519(-) (coiA) [Staphylococcus aureus strain 33-40]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGGACAGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966