Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   QPR37_RS10710 Genome accession   NZ_CP126631
Coordinates   2175246..2176118 (-) Length   290 a.a.
NCBI ID   WP_063651291.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 33-40     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2170246..2181118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR37_RS10700 (QPR37_10700) trmFO 2171533..2172840 (-) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -
  QPR37_RS10705 (QPR37_10705) topA 2172997..2175072 (-) 2076 WP_285146937.1 type I DNA topoisomerase -
  QPR37_RS10710 (QPR37_10710) dprA 2175246..2176118 (-) 873 WP_063651291.1 DNA-processing protein DprA Machinery gene
  QPR37_RS10715 (QPR37_10715) fmhC 2176291..2177534 (-) 1244 Protein_2067 FemA/FemB family glycyltransferase FmhC -
  QPR37_RS10720 (QPR37_10720) - 2177562..2178680 (-) 1119 WP_285159256.1 LysM peptidoglycan-binding domain-containing protein -
  QPR37_RS10725 (QPR37_10725) sucD 2178907..2179815 (-) 909 WP_063651293.1 succinate--CoA ligase subunit alpha -
  QPR37_RS10730 (QPR37_10730) sucC 2179837..2181003 (-) 1167 WP_063651295.1 ADP-forming succinate--CoA ligase subunit beta -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33633.07 Da        Isoelectric Point: 9.4940

>NTDB_id=839340 QPR37_RS10710 WP_063651291.1 2175246..2176118(-) (dprA) [Staphylococcus aureus strain 33-40]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDYNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=839340 QPR37_RS10710 WP_063651291.1 2175246..2176118(-) (dprA) [Staphylococcus aureus strain 33-40]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGAAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATTATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGTCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATCGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.966

100

0.99
  dprA Staphylococcus aureus N315

98.621

100

0.986