Detailed information NTG0083933

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: JN157_RS07445
• Genome accession: NZ_AP024200
• Coordinates: 1600557..1602758 (-)
• Length: 733 a.a.
• NCBI ID: WP_047526757.1
• Uniprot ID: -
• Organism: Staphylococcus argenteus strain Tokyo13064
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1595557..1607758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN157_RS07425 (TMSFP064_14450)	hemW	1595727..1596851 (-)	1125	WP_047526750.1	radical SAM family heme chaperone HemW	-
JN157_RS07430 (TMSFP064_14460)	lepA	1597056..1598879 (-)	1824	WP_000356945.1	translation elongation factor 4	-
JN157_RS07435 (TMSFP064_14470)	rpsT	1599225..1599476 (+)	252	WP_001274017.1	30S ribosomal protein S20	-
JN157_RS07440 (TMSFP064_14480)	holA	1599526..1600500 (-)	975	WP_047526755.1	DNA polymerase III subunit delta	-
JN157_RS07445 (TMSFP064_14490)	comEC	1600557..1602758 (-)	2202	WP_047526757.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JN157_RS07450 (TMSFP064_14500)	-	1602763..1603224 (-)	462	WP_000439691.1	ComE operon protein 2	-
JN157_RS07455 (TMSFP064_14510)	comEA	1603316..1604017 (-)	702	WP_072292026.1	ComEA family DNA-binding protein	Machinery gene
JN157_RS07460 (TMSFP064_14520)	-	1604057..1604773 (-)	717	WP_047526761.1	class I SAM-dependent DNA methyltransferase	-
JN157_RS07465 (TMSFP064_14530)	rsfS	1604776..1605129 (-)	354	WP_001088023.1	ribosome silencing factor	-
JN157_RS07470 (TMSFP064_14540)	yqeK	1605130..1605714 (-)	585	WP_047430812.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
JN157_RS07475 (TMSFP064_14550)	-	1605704..1606273 (-)	570	WP_047526764.1	nicotinate-nucleotide adenylyltransferase	-
JN157_RS07480 (TMSFP064_14560)	yhbY	1606276..1606566 (-)	291	WP_000955238.1	ribosome assembly RNA-binding protein YhbY	-
JN157_RS07485 (TMSFP064_14570)	aroE	1606571..1607377 (-)	807	WP_047526766.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 84982.08 Da
• Isoelectric Point: 10.0998

>NTDB_id=83933 JN157_RS07445 WP_047526757.1 1600557..1602758(-) (comEC) [Staphylococcus argenteus strain Tokyo13064]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPISLFLIIFSSWYLHYSQQAVFNYINYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTVKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYFVDLSFNFH
DWLLDLFTRIKQSHFSIPKFNDWIFILFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNSHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQVSSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYKLPEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide

• Length: 2202 bp

>NTDB_id=83933 JN157_RS07445 WP_047526757.1 1600557..1602758(-) (comEC) [Staphylococcus argenteus strain Tokyo13064]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTTCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCACAACAAGCAGTATTTAATTATATCAATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTCT
AACAGTTAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ACAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCCATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACACTAGT
ACTCCTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTTTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGACCTATTCACTCGAATCAAGCAATCACATTTTTCTATTCCTAAGTTTAATGATTGGATATTTATATT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACATATCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGATAGTATT
TTATATGAAGGCGGGAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTTATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTAGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAGTTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATACTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGTGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAAATTGCCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAAGTGATTAGGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (183-441)

• Metallo-beta-lactamase superfamily (Lactamase_B) (474-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Staphylococcus aureus N315	95.771	100	0.958
comEC	Staphylococcus aureus MW2	95.498	100	0.955