Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QPL68_RS13215 Genome accession   NZ_CP126629
Coordinates   2716342..2717385 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 35-42     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2711342..2722385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL68_RS13185 (QPL68_13185) - 2712131..2712241 (+) 111 WP_001790257.1 hypothetical protein -
  QPL68_RS13190 (QPL68_13190) - 2712270..2712683 (+) 414 WP_141060381.1 hypothetical protein -
  QPL68_RS13195 (QPL68_13195) - 2712872..2713858 (-) 987 WP_000999712.1 aromatic acid exporter family protein -
  QPL68_RS13200 (QPL68_13200) map 2714268..2715026 (+) 759 WP_063651082.1 type I methionyl aminopeptidase -
  QPL68_RS13205 (QPL68_13205) - 2715243..2715629 (+) 387 WP_001110174.1 hypothetical protein -
  QPL68_RS13210 (QPL68_13210) liaF 2715644..2716345 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QPL68_RS13215 (QPL68_13215) vraS 2716342..2717385 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QPL68_RS13220 (QPL68_13220) vraR 2717375..2718004 (+) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  QPL68_RS13225 (QPL68_13225) - 2718117..2719334 (-) 1218 WP_063651080.1 YihY/virulence factor BrkB family protein -
  QPL68_RS13230 (QPL68_13230) - 2719612..2719887 (-) 276 WP_063651078.1 YtxH domain-containing protein -
  QPL68_RS13235 (QPL68_13235) - 2719894..2720358 (-) 465 WP_063651075.1 low molecular weight protein-tyrosine-phosphatase -
  QPL68_RS13240 (QPL68_13240) - 2720505..2720705 (+) 201 WP_000180460.1 DUF1128 family protein -
  QPL68_RS13245 (QPL68_13245) - 2720708..2721964 (+) 1257 WP_217151847.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=839305 QPL68_RS13215 WP_001017131.1 2716342..2717385(+) (vraS) [Staphylococcus aureus strain 35-42]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=839305 QPL68_RS13215 WP_001017131.1 2716342..2717385(+) (vraS) [Staphylococcus aureus strain 35-42]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTACTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTGCAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1