Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   VOI49_RS06945 Genome accession   NZ_CP142018
Coordinates   1382365..1383027 (-) Length   220 a.a.
NCBI ID   WP_003051564.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain lu24     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1377365..1388027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VOI49_RS06930 sodA 1378318..1378923 (-) 606 WP_003051555.1 superoxide dismutase SodA -
  VOI49_RS06935 holA 1379013..1380059 (-) 1047 WP_226313783.1 DNA polymerase III subunit delta -
  VOI49_RS06940 comEC/celB 1380141..1382384 (-) 2244 WP_226323453.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  VOI49_RS06945 comEA/celA/cilE 1382365..1383027 (-) 663 WP_003051564.1 helix-hairpin-helix domain-containing protein Machinery gene
  VOI49_RS06950 - 1383424..1384164 (-) 741 WP_003051567.1 lysophospholipid acyltransferase family protein -
  VOI49_RS06955 - 1384282..1385058 (+) 777 WP_126426874.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  VOI49_RS06960 - 1385048..1385326 (+) 279 WP_115246202.1 GIY-YIG nuclease family protein -
  VOI49_RS06965 - 1385350..1387350 (-) 2001 WP_226313825.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24162.57 Da        Isoelectric Point: 5.8872

>NTDB_id=839201 VOI49_RS06945 WP_003051564.1 1382365..1383027(-) (comEA/celA/cilE) [Streptococcus dysgalactiae strain lu24]
MIDDLLTKGTNSLRKIYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYPSEESNILVDLK
GAVQQEGVYKLRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSASKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=839201 VOI49_RS06945 WP_003051564.1 1382365..1383027(-) (comEA/celA/cilE) [Streptococcus dysgalactiae strain lu24]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAGAAAGATTTATTCTCTGCCACGCTTGATTGGTGTTGTGTT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGAAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATCCTTCAGAAGAGAGTAATATTCTAGTGGATTTGAAA
GGAGCCGTACAACAGGAGGGAGTTTATAAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAAGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAGGCAAATTTAGAGGAGTTACAACGTATTTCGGGAATTGGTGTAAAAAGAGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGGCAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGATTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.105

95

0.4