Detailed information NTG0839008

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: VFH86_RS00760
• Genome accession: NZ_CP142014
• Coordinates: 158595..159995 (-)
• Length: 466 a.a.
• NCBI ID: WP_281052142.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain LK-18
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 153595..164995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VFH86_RS00750 (VFH86_00750)	add	154909..155913 (-)	1005	WP_345657978.1	adenosine deaminase	-
VFH86_RS00755 (VFH86_00755)	-	156005..158536 (-)	2532	WP_345657980.1	EAL domain-containing protein	-
VFH86_RS00760 (VFH86_00760)	luxO	158595..159995 (-)	1401	WP_281052142.1	nitrogen regulation protein NR(I)	Regulator
VFH86_RS00765 (VFH86_00765)	glnL	160005..161063 (-)	1059	WP_001935745.1	nitrogen regulation protein NR(II)	-
VFH86_RS00770 (VFH86_00770)	-	161202..161792 (-)	591	WP_142610555.1	DUF4124 domain-containing protein	-
VFH86_RS00775 (VFH86_00775)	glnA	161970..163379 (-)	1410	WP_000110151.1	glutamate--ammonia ligase	-
VFH86_RS00780 (VFH86_00780)	-	163524..163847 (+)	324	WP_000244706.1	hypothetical protein	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52347.86 Da
• Isoelectric Point: 6.6387

>NTDB_id=839008 VFH86_RS00760 WP_281052142.1 158595..159995(-) (luxO) [Vibrio cholerae strain LK-18]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKVSHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=839008 VFH86_RS00760 WP_281052142.1 158595..159995(-) (luxO) [Vibrio cholerae strain LK-18]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTCGTCTCAG
ACATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTGCACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTTTGCATCGACACAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAACATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGTGCGTTTACTGGTGCCAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTACGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGTCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.204	99.785	0.371