Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QPR36_RS14510 Genome accession   NZ_CP126577
Coordinates   2989267..2990253 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus velezensis strain 411     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2984267..2995253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR36_RS14475 (QPR36_14475) - 2984523..2984999 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  QPR36_RS14480 (QPR36_14480) - 2984999..2985283 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  QPR36_RS14485 (QPR36_14485) mnhG 2985267..2985641 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QPR36_RS14490 (QPR36_14490) - 2985681..2986064 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  QPR36_RS14495 (QPR36_14495) comA 2986086..2986730 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  QPR36_RS14500 (QPR36_14500) comP 2986811..2989114 (-) 2304 WP_069473559.1 histidine kinase Regulator
  QPR36_RS14505 (QPR36_14505) comX 2989134..2989313 (-) 180 WP_306383677.1 competence pheromone ComX -
  QPR36_RS14510 (QPR36_14510) comQ 2989267..2990253 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  QPR36_RS14515 (QPR36_14515) degQ 2990384..2990524 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QPR36_RS14520 (QPR36_14520) - 2990990..2991331 (+) 342 WP_014305721.1 hypothetical protein -
  QPR36_RS14525 (QPR36_14525) - 2991338..2992558 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  QPR36_RS14530 (QPR36_14530) - 2992688..2994154 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  QPR36_RS14535 (QPR36_14535) - 2994172..2994723 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  QPR36_RS14540 (QPR36_14540) - 2994820..2995218 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=838897 QPR36_RS14510 WP_269321599.1 2989267..2990253(-) (comQ) [Bacillus velezensis strain 411]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=838897 QPR36_RS14510 WP_269321599.1 2989267..2990253(-) (comQ) [Bacillus velezensis strain 411]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54