Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QPK28_RS17480 Genome accession   NZ_CP126576
Coordinates   3301060..3303366 (-) Length   768 a.a.
NCBI ID   WP_119498753.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CQMB003     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3296060..3308366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS17440 - 3296523..3296954 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  QPK28_RS17445 - 3296954..3297295 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  QPK28_RS17450 - 3297288..3298766 (+) 1479 WP_025804921.1 Na+/H+ antiporter subunit D -
  QPK28_RS17455 - 3298772..3299248 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  QPK28_RS17460 - 3299248..3299532 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  QPK28_RS17465 mnhG 3299516..3299890 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  QPK28_RS17470 - 3299930..3300319 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  QPK28_RS17475 - 3300336..3300973 (-) 638 Protein_3390 response regulator transcription factor -
  QPK28_RS17480 comP 3301060..3303366 (-) 2307 WP_119498753.1 ATP-binding protein Regulator
  QPK28_RS17485 comX 3303389..3303553 (-) 165 WP_003184853.1 competence pheromone ComX -
  QPK28_RS17490 - 3303562..3304443 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  QPK28_RS17495 degQ 3304632..3304772 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  QPK28_RS17500 - 3305258..3305605 (+) 348 WP_009329512.1 hypothetical protein -
  QPK28_RS17505 - 3305648..3306868 (-) 1221 WP_003184864.1 HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 88374.68 Da        Isoelectric Point: 6.8179

>NTDB_id=838816 QPK28_RS17480 WP_119498753.1 3301060..3303366(-) (comP) [Bacillus licheniformis strain CQMB003]
MKFSLKLVSVTLVVITCIYTFFVIYLCYNNMFVGAYLAYNSKNQLVVDYVEEDSLADYTGLKAGDIILEVNNEKPSKKEP
KNKILADVRSLSIERNGKIITTDTRDTIISYDVLFTVLIPVVFYLLCMFCVFLILKSNKTNKQMSSFLLISFLIIISLAY
VSVGGVSRGDKFSRYLNLLTFLSVPASYYHFILQYFKEIGKKFFSNKILLLYALPFLNIVLEIFYDLTDFLEEGRPYVNL
FSFFIGIVLVFGVIIYGIIKYKHSEEIYFLKMLMLGNFLGVFPFVVFFVLPILIIGDYIYSAAVVAPCLLIIPFSLVYQF
ISNKTYDVEFLVGRLKYYGLLAIIPTIMLISAFKLIKYQTGDYYDLRFTIYIYLVMLGVFYLKEILDYRFRLKRFSEKYN
YQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAEEYPWIPYEQEVTKVITDIGKIVE
VDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMF
AIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLG
LVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGI
GVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=838816 QPK28_RS17480 WP_119498753.1 3301060..3303366(-) (comP) [Bacillus licheniformis strain CQMB003]
ATGAAATTTTCATTGAAGTTAGTGTCAGTAACTCTTGTGGTGATTACCTGTATATATACTTTCTTTGTTATATATCTATG
TTATAACAACATGTTTGTAGGTGCATACTTAGCCTACAATTCGAAAAACCAGCTAGTTGTGGATTATGTTGAGGAAGATT
CCTTAGCCGATTATACGGGTTTAAAAGCTGGAGATATCATTCTTGAGGTTAATAATGAGAAGCCGTCTAAGAAGGAACCA
AAAAATAAAATTCTAGCAGATGTCCGTTCACTTTCTATTGAGAGAAATGGAAAAATCATTACAACTGATACAAGGGATAC
TATTATTAGTTATGATGTTTTATTTACTGTTTTAATCCCGGTTGTATTTTATTTATTATGCATGTTTTGTGTGTTTTTGA
TTTTAAAATCTAACAAGACGAATAAACAAATGTCTTCATTTTTGCTAATTTCATTTTTAATCATAATTTCACTGGCTTAT
GTAAGTGTCGGTGGAGTTTCAAGAGGTGATAAATTTAGCCGATATCTGAATTTGTTAACCTTTCTATCAGTACCTGCTAG
TTATTATCACTTTATACTTCAATATTTCAAAGAAATTGGCAAAAAATTCTTTAGCAATAAAATATTGTTGCTCTATGCTT
TACCTTTCTTGAATATCGTTTTAGAAATTTTTTATGACCTTACTGATTTTCTTGAGGAAGGTAGGCCATATGTCAATTTG
TTTTCGTTCTTTATAGGAATTGTTTTAGTTTTCGGAGTTATTATTTACGGTATAATTAAATATAAGCATTCAGAGGAAAT
TTATTTCTTGAAAATGCTTATGTTAGGAAATTTCCTTGGTGTTTTTCCTTTTGTAGTATTCTTTGTTCTTCCAATTTTAA
TTATTGGGGATTATATTTATTCCGCCGCAGTAGTAGCTCCATGTCTATTGATCATTCCGTTTTCTTTAGTTTATCAATTC
ATATCTAATAAAACTTATGATGTGGAGTTTTTGGTTGGAAGATTAAAATACTATGGCCTATTGGCGATTATTCCAACAAT
TATGTTGATATCTGCTTTCAAGCTAATAAAGTATCAAACTGGGGACTACTATGATCTAAGATTCACAATCTATATCTACC
TGGTCATGCTCGGTGTTTTTTACCTTAAAGAAATCCTTGATTACCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAAC
TACCAAGACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACA
AACAATTCTCGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAG
AAGATGCCGAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTCATCACCGATATCGGCAAAATCGTCGAA
GTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATAC
GCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGA
AAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTT
GCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCA
TCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGA
ATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGA
CTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAG
GTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAAC
ATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATT
GGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAA
CGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(679-764)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.387

100

0.529