Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | QMK35_RS06540 | Genome accession | NZ_CP126540 |
| Coordinates | 1371783..1372757 (+) | Length | 324 a.a. |
| NCBI ID | WP_107386654.1 | Uniprot ID | A0A2T4LQ09 |
| Organism | Staphylococcus cohnii strain SDAQ-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1366783..1377757
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK35_RS06505 (QMK35_06505) | rpmG | 1366999..1367148 (+) | 150 | WP_019469354.1 | 50S ribosomal protein L33 | - |
| QMK35_RS06510 (QMK35_06510) | - | 1367283..1367825 (+) | 543 | WP_107386680.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| QMK35_RS06515 (QMK35_06515) | - | 1367837..1369288 (+) | 1452 | WP_285159958.1 | rhomboid family intramembrane serine protease | - |
| QMK35_RS06520 (QMK35_06520) | - | 1369278..1369478 (+) | 201 | WP_181187593.1 | YqgQ family protein | - |
| QMK35_RS06525 (QMK35_06525) | - | 1369788..1370774 (+) | 987 | WP_285159959.1 | glucokinase | - |
| QMK35_RS06530 (QMK35_06530) | - | 1370774..1371097 (+) | 324 | WP_107385048.1 | MTH1187 family thiamine-binding protein | - |
| QMK35_RS06535 (QMK35_06535) | - | 1371100..1371723 (+) | 624 | WP_107385049.1 | MBL fold metallo-hydrolase | - |
| QMK35_RS06540 (QMK35_06540) | comGA | 1371783..1372757 (+) | 975 | WP_107386654.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QMK35_RS06545 (QMK35_06545) | comGB | 1372729..1373796 (+) | 1068 | WP_233431500.1 | competence type IV pilus assembly protein ComGB | - |
| QMK35_RS06550 (QMK35_06550) | comGC | 1373816..1374133 (+) | 318 | WP_107505267.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QMK35_RS06555 (QMK35_06555) | comGD | 1374123..1374563 (+) | 441 | WP_107386699.1 | competence type IV pilus minor pilin ComGD | - |
| QMK35_RS06560 (QMK35_06560) | comGF | 1374815..1375258 (+) | 444 | WP_107386709.1 | competence type IV pilus minor pilin ComGF | - |
| QMK35_RS06565 (QMK35_06565) | - | 1375423..1375947 (+) | 525 | WP_107385157.1 | shikimate kinase | - |
| QMK35_RS06570 (QMK35_06570) | gcvT | 1376105..1377196 (+) | 1092 | WP_107385156.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36981.98 Da Isoelectric Point: 9.2636
>NTDB_id=838679 QMK35_RS06540 WP_107386654.1 1371783..1372757(+) (comGA) [Staphylococcus cohnii strain SDAQ-1]
MKLLFKNIIDKAINENVSDVHFIPDQNKVHIKFRKKEYLSTIETVEVHIYRKLLTYMKYQAGLDVSTHSTAQSGRYAYKL
KQLYYLRVSTLPLSLGFESCVVRIIPQYFQNSAKALSINQLFKLVHKKQGLILFSGPTGSGKSTLMYQLIVHAKEHLNVN
IITVEDPVERLVEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDAMIAKQVIHASLSGHLVLSTIHSNNCKGAL
SRLLEMGITIQELRQTVLSIINQRLVITSKNESSLIYEQLNREDIAFYFENQLTLPNTFKNLSYKLQEMAKEGEICEETL
NRYL
MKLLFKNIIDKAINENVSDVHFIPDQNKVHIKFRKKEYLSTIETVEVHIYRKLLTYMKYQAGLDVSTHSTAQSGRYAYKL
KQLYYLRVSTLPLSLGFESCVVRIIPQYFQNSAKALSINQLFKLVHKKQGLILFSGPTGSGKSTLMYQLIVHAKEHLNVN
IITVEDPVERLVEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDAMIAKQVIHASLSGHLVLSTIHSNNCKGAL
SRLLEMGITIQELRQTVLSIINQRLVITSKNESSLIYEQLNREDIAFYFENQLTLPNTFKNLSYKLQEMAKEGEICEETL
NRYL
Nucleotide
Download Length: 975 bp
>NTDB_id=838679 QMK35_RS06540 WP_107386654.1 1371783..1372757(+) (comGA) [Staphylococcus cohnii strain SDAQ-1]
TTGAAGTTACTCTTTAAAAATATTATTGATAAAGCTATTAATGAAAATGTATCAGATGTACACTTTATCCCTGACCAAAA
CAAAGTACACATTAAATTTAGGAAAAAAGAATATTTAAGCACTATAGAAACAGTAGAAGTTCATATTTATAGGAAATTGC
TCACATATATGAAATATCAAGCTGGCTTAGATGTCTCAACACATAGCACTGCGCAAAGTGGAAGATATGCTTACAAACTC
AAACAATTATACTATTTAAGAGTTTCAACTTTACCTTTATCTCTAGGATTTGAAAGTTGTGTAGTGAGAATTATACCTCA
ATACTTTCAAAATTCTGCAAAAGCACTTAGTATTAATCAATTATTTAAGCTAGTTCATAAAAAACAAGGGTTAATATTGT
TTAGTGGTCCGACGGGATCAGGAAAAAGTACATTAATGTATCAGCTCATAGTACACGCAAAGGAGCATTTAAATGTTAAC
ATCATTACCGTAGAAGATCCTGTAGAGCGTTTAGTTGAGGGAATTACACAAGTGTCTATCAACGAAAAAGCAGGTATTAA
TTATGCTAATTCTTTTAAGGCTATTTTGAGGTGTGATCCTGATATAATACTCATTGGTGAAATCAGGGATGCAATGATTG
CTAAACAAGTAATTCATGCAAGTTTAAGTGGGCATTTAGTACTTTCAACAATACATTCAAATAATTGTAAAGGAGCATTG
AGTAGATTATTAGAAATGGGCATTACTATTCAAGAACTGCGACAGACGGTATTAAGTATTATTAATCAGAGATTAGTAAT
CACTTCAAAGAATGAAAGTTCCCTTATTTATGAACAATTAAACCGTGAAGATATAGCCTTTTATTTTGAAAATCAACTTA
CACTTCCGAATACATTCAAAAATTTATCTTACAAATTGCAAGAAATGGCAAAAGAAGGAGAAATTTGTGAAGAAACACTC
AATAGATACCTTTAA
TTGAAGTTACTCTTTAAAAATATTATTGATAAAGCTATTAATGAAAATGTATCAGATGTACACTTTATCCCTGACCAAAA
CAAAGTACACATTAAATTTAGGAAAAAAGAATATTTAAGCACTATAGAAACAGTAGAAGTTCATATTTATAGGAAATTGC
TCACATATATGAAATATCAAGCTGGCTTAGATGTCTCAACACATAGCACTGCGCAAAGTGGAAGATATGCTTACAAACTC
AAACAATTATACTATTTAAGAGTTTCAACTTTACCTTTATCTCTAGGATTTGAAAGTTGTGTAGTGAGAATTATACCTCA
ATACTTTCAAAATTCTGCAAAAGCACTTAGTATTAATCAATTATTTAAGCTAGTTCATAAAAAACAAGGGTTAATATTGT
TTAGTGGTCCGACGGGATCAGGAAAAAGTACATTAATGTATCAGCTCATAGTACACGCAAAGGAGCATTTAAATGTTAAC
ATCATTACCGTAGAAGATCCTGTAGAGCGTTTAGTTGAGGGAATTACACAAGTGTCTATCAACGAAAAAGCAGGTATTAA
TTATGCTAATTCTTTTAAGGCTATTTTGAGGTGTGATCCTGATATAATACTCATTGGTGAAATCAGGGATGCAATGATTG
CTAAACAAGTAATTCATGCAAGTTTAAGTGGGCATTTAGTACTTTCAACAATACATTCAAATAATTGTAAAGGAGCATTG
AGTAGATTATTAGAAATGGGCATTACTATTCAAGAACTGCGACAGACGGTATTAAGTATTATTAATCAGAGATTAGTAAT
CACTTCAAAGAATGAAAGTTCCCTTATTTATGAACAATTAAACCGTGAAGATATAGCCTTTTATTTTGAAAATCAACTTA
CACTTCCGAATACATTCAAAAATTTATCTTACAAATTGCAAGAAATGGCAAAAGAAGGAGAAATTTGTGAAGAAACACTC
AATAGATACCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.642 |
100 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.642 |
100 |
0.586 |