Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QN218_RS16745 Genome accession   NZ_CP126534
Coordinates   3294759..3295709 (-) Length   316 a.a.
NCBI ID   WP_003240192.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain BSY82     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3289759..3300709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN218_RS16725 - 3290628..3292046 (+) 1419 WP_003240201.1 MDR family MFS transporter -
  QN218_RS16730 - 3292092..3293045 (-) 954 WP_060397924.1 siderophore ABC transporter substrate-binding protein -
  QN218_RS16735 yclP 3293067..3293825 (-) 759 WP_003240196.1 petrobactin ABC transporter ATP-binding protein YclP -
  QN218_RS16740 yclO 3293819..3294766 (-) 948 WP_060397923.1 petrobactin ABC transporter permease YclO -
  QN218_RS16745 ceuB 3294759..3295709 (-) 951 WP_003240192.1 petrobactin ABC transporter permease YclN Machinery gene
  QN218_RS16750 - 3296094..3297458 (+) 1365 WP_060397922.1 aspartate kinase -
  QN218_RS16755 - 3297609..3297716 (+) 108 WP_019257466.1 YjcZ family sporulation protein -
  QN218_RS16760 phrC 3297812..3297934 (-) 123 WP_003240188.1 phosphatase RapC inhibitor PhrC Regulator
  QN218_RS16765 rapC 3297918..3299066 (-) 1149 WP_019257465.1 response regulator aspartate phosphatase RapC Regulator
  QN218_RS16770 - 3299224..3300645 (-) 1422 WP_080428959.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34848.21 Da        Isoelectric Point: 9.8375

>NTDB_id=838583 QN218_RS16745 WP_003240192.1 3294759..3295709(-) (ceuB) [Bacillus inaquosorum strain BSY82]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSNQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGSIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYIYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLVTSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=838583 QN218_RS16745 WP_003240192.1 3294759..3295709(-) (ceuB) [Bacillus inaquosorum strain BSY82]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTGGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAACCAAGAGGCGTCAACGCTGTTTGCTAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCTGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCATTTGTCTTTGCCCTTGCAGGAAATTTCTTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACGATCT
TTATTCCGCTTGTCGGGTTAATGCTCGGGAGTATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAAGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATATTTATGCGGATAAATTCACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGGTCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTCAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522