Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QN218_RS12570 Genome accession   NZ_CP126534
Coordinates   2405429..2405620 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus inaquosorum strain BSY82     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2400429..2410620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN218_RS12545 appD 2400769..2401755 (-) 987 WP_060398372.1 oligopeptide ABC transporter ATP-binding protein AppD -
  QN218_RS12550 - 2401944..2402729 (-) 786 WP_060398371.1 DUF2268 domain-containing protein -
  QN218_RS12555 fabF 2402806..2404047 (-) 1242 WP_060398370.1 beta-ketoacyl-ACP synthase II -
  QN218_RS12560 fabH 2404070..2405008 (-) 939 WP_060398369.1 beta-ketoacyl-ACP synthase III -
  QN218_RS12565 - 2405172..2405399 (+) 228 WP_080010764.1 hypothetical protein -
  QN218_RS12570 comZ 2405429..2405620 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QN218_RS12575 med 2405635..2406588 (-) 954 WP_019258048.1 transcriptional regulator Med Regulator
  QN218_RS12580 - 2406679..2407236 (-) 558 WP_060398368.1 hypothetical protein -
  QN218_RS12585 - 2407318..2408052 (-) 735 WP_003239317.1 hypothetical protein -
  QN218_RS12590 - 2408304..2408489 (+) 186 WP_003224551.1 YjzD family protein -
  QN218_RS12595 - 2408535..2408714 (-) 180 WP_003239319.1 YjzC family protein -
  QN218_RS12600 argF 2408816..2409760 (-) 945 WP_060398367.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=838572 QN218_RS12570 WP_003224559.1 2405429..2405620(-) (comZ) [Bacillus inaquosorum strain BSY82]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=838572 QN218_RS12570 WP_003224559.1 2405429..2405620(-) (comZ) [Bacillus inaquosorum strain BSY82]
ATGCAGCACGAAAAATCACTGGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGATGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1