Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QPL84_RS20600 Genome accession   NZ_CP126525
Coordinates   4033071..4033865 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain Puebla_S2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4028071..4038865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL84_RS20575 (QPL84_20575) - 4029033..4029455 (-) 423 WP_284558158.1 hypothetical protein -
  QPL84_RS20580 (QPL84_20580) - 4029471..4030352 (-) 882 WP_284558159.1 phage antirepressor KilAC domain-containing protein -
  QPL84_RS20585 (QPL84_20585) - 4030355..4030603 (-) 249 WP_284558160.1 hypothetical protein -
  QPL84_RS20590 (QPL84_20590) - 4030839..4031138 (-) 300 WP_284558161.1 hypothetical protein -
  QPL84_RS20595 (QPL84_20595) - 4031943..4032917 (-) 975 WP_284558162.1 tyrosine-type recombinase/integrase -
  QPL84_RS20600 (QPL84_20600) spo0A 4033071..4033865 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  QPL84_RS20605 (QPL84_20605) spoIVB 4034154..4035452 (-) 1299 WP_284558163.1 SpoIVB peptidase -
  QPL84_RS20610 (QPL84_20610) recN 4035571..4037310 (-) 1740 WP_000947741.1 DNA repair protein RecN Machinery gene
  QPL84_RS20615 (QPL84_20615) argR 4037572..4038021 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=838427 QPL84_RS20600 WP_000411416.1 4033071..4033865(-) (spo0A) [Bacillus toyonensis strain Puebla_S2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=838427 QPL84_RS20600 WP_000411416.1 4033071..4033865(-) (spo0A) [Bacillus toyonensis strain Puebla_S2]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814