Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | VDS57_RS18300 | Genome accession | NZ_CP141839 |
| Coordinates | 3435078..3436103 (+) | Length | 341 a.a. |
| NCBI ID | WP_003245451.1 | Uniprot ID | O34470 |
| Organism | Bacillus subtilis strain PN1236 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3430078..3441103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VDS57_RS18265 (VDS57_18265) | ylbE | 3430378..3430617 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| VDS57_RS18270 (VDS57_18270) | ylbF | 3430733..3431182 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| VDS57_RS18275 (VDS57_18275) | ylbG | 3431237..3431509 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| VDS57_RS18280 (VDS57_18280) | rsmD | 3431832..3432386 (+) | 555 | WP_017694816.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| VDS57_RS18285 (VDS57_18285) | coaD | 3432391..3432876 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| VDS57_RS18290 (VDS57_18290) | spoVV | 3432887..3434113 (-) | 1227 | WP_014479716.1 | dipicolinic acid transporter SpoVV | - |
| VDS57_RS18295 (VDS57_18295) | ylbK | 3434294..3435076 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| VDS57_RS18300 (VDS57_18300) | sepM | 3435078..3436103 (+) | 1026 | WP_003245451.1 | protease DdcP | Regulator |
| VDS57_RS18305 (VDS57_18305) | tmcAL | 3436120..3437367 (-) | 1248 | WP_014479717.1 | nucleotidyltransferase | - |
| VDS57_RS18310 (VDS57_18310) | - | 3437364..3437549 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| VDS57_RS18315 (VDS57_18315) | ylbN | 3437577..3438095 (+) | 519 | WP_014479718.1 | YceD family protein | - |
| VDS57_RS18320 (VDS57_18320) | rpmF | 3438117..3438296 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| VDS57_RS18325 (VDS57_18325) | gerR | 3438442..3439023 (+) | 582 | WP_014479720.1 | sporulation specific transcriptional regulator GerR | - |
| VDS57_RS18330 (VDS57_18330) | ylbP | 3439080..3439562 (-) | 483 | WP_014476736.1 | N-acetyltransferase | - |
| VDS57_RS18335 (VDS57_18335) | panEA | 3439722..3440618 (+) | 897 | WP_014479721.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37651.23 Da Isoelectric Point: 6.5347
>NTDB_id=838394 VDS57_RS18300 WP_003245451.1 3435078..3436103(+) (sepM) [Bacillus subtilis strain PN1236]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=838394 VDS57_RS18300 WP_003245451.1 3435078..3436103(+) (sepM) [Bacillus subtilis strain PN1236]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CTGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTAATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGTCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
TGGGAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CTGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTAATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGTCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
TGGGAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |