Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   QPL77_RS05120 Genome accession   NZ_CP126521
Coordinates   1060070..1061020 (+) Length   316 a.a.
NCBI ID   WP_211063207.1    Uniprot ID   -
Organism   Bacillus pumilus strain Monterrey_S2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1055070..1066020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL77_RS05085 (QPL77_05085) - 1055214..1056074 (+) 861 WP_211063210.1 SDR family oxidoreductase -
  QPL77_RS05090 (QPL77_05090) - 1056137..1056367 (-) 231 WP_003210924.1 IDEAL domain-containing protein -
  QPL77_RS05095 (QPL77_05095) comK 1056656..1057234 (+) 579 WP_012009479.1 competence protein ComK Regulator
  QPL77_RS05100 (QPL77_05100) - 1057394..1058500 (+) 1107 WP_211063209.1 D-TA family PLP-dependent enzyme -
  QPL77_RS05105 (QPL77_05105) - 1058813..1059295 (+) 483 WP_144522804.1 hypothetical protein -
  QPL77_RS05110 (QPL77_05110) - 1059303..1059563 (+) 261 WP_249407378.1 hypothetical protein -
  QPL77_RS05115 (QPL77_05115) - 1059629..1059904 (+) 276 WP_211063208.1 barstar family protein -
  QPL77_RS05120 (QPL77_05120) ceuB 1060070..1061020 (+) 951 WP_211063207.1 ABC transporter permease Machinery gene
  QPL77_RS05125 (QPL77_05125) - 1061013..1061963 (+) 951 WP_211063206.1 iron chelate uptake ABC transporter family permease subunit -
  QPL77_RS05130 (QPL77_05130) - 1061954..1062712 (+) 759 WP_211063205.1 ATP-binding cassette domain-containing protein -
  QPL77_RS05135 (QPL77_05135) - 1062735..1063679 (+) 945 WP_211063204.1 siderophore ABC transporter substrate-binding protein -
  QPL77_RS05140 (QPL77_05140) - 1063820..1064788 (+) 969 WP_012009489.1 LCP family protein -
  QPL77_RS05145 (QPL77_05145) - 1064858..1065220 (-) 363 WP_003210969.1 hypothetical protein -
  QPL77_RS05150 (QPL77_05150) - 1065371..1065988 (+) 618 WP_211063203.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34948.38 Da        Isoelectric Point: 9.7820

>NTDB_id=838298 QPL77_RS05120 WP_211063207.1 1060070..1061020(+) (ceuB) [Bacillus pumilus strain Monterrey_S2]
MKLYQLSLLFVCLACVSLFVGVQDLSILQLFHLTDEQVHTLVSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQASPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSVWLQGDFSLIVQGRYELLYMSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRHA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=838298 QPL77_RS05120 WP_211063207.1 1060070..1061020(+) (ceuB) [Bacillus pumilus strain Monterrey_S2]
ATGAAGTTGTATCAATTAAGTTTATTATTTGTATGTTTGGCATGTGTATCACTGTTTGTCGGTGTACAGGATTTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCATACGTTAGTTTCAAGTCGCATCCCGCGTCTCATGAGTATTGTGC
TTGCTGGCATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGTATGACGAGGAATAAATTTGTTTCCCCCACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTCGCAATGCTTGTTTTTACGCAGGCGAGCCCGCTCATGAAAATGGG
CATCGCGTTTCTATTTACTTTAGCTGGGAACCTTCTTTTCTTAAAAATTCTGCGGCATATTAAGGTGAACGATACGATCT
ATGTACCGTTAGTCGGCTTAATGTTTGGCGGGATTGTTAGTTCAATATCTACGTTTATAGCCTATAAATATGATCTGATC
CAAAACGTATCCGTATGGCTTCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATATGAGTGTTCC
ACTTTTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGTATGGGCGAGAGCTTTGCTGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCGATGATTACATCTGTCACCATATTAACTGTCGGGATG
CTGCCATTCCTAGGCTTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCATTTGAAAAAGAGCCTTCCGCATAC
AGCCTTACTAGGAGCCATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATTTCAGTTG
GGCTTATGGTCGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTGAGGAGGAAACGCCATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491