Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QOM09_RS21030 Genome accession   NZ_CP126474
Coordinates   4100081..4100875 (-) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus thuringiensis strain DHC4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4095081..4105875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOM09_RS21005 (QOM09_21005) - 4095606..4097678 (-) 2073 WP_000810974.1 sigma-54-dependent Fis family transcriptional regulator -
  QOM09_RS21010 (QOM09_21010) - 4097816..4098049 (+) 234 WP_053512780.1 DUF2627 domain-containing protein -
  QOM09_RS21015 (QOM09_21015) - 4098099..4098827 (-) 729 WP_000172580.1 glycerophosphodiester phosphodiesterase -
  QOM09_RS21020 (QOM09_21020) - 4098878..4099024 (+) 147 WP_001247671.1 YycC family protein -
  QOM09_RS21025 (QOM09_21025) - 4099265..4099828 (-) 564 WP_053512779.1 PRK06770 family protein -
  QOM09_RS21030 (QOM09_21030) spo0A 4100081..4100875 (-) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  QOM09_RS21035 (QOM09_21035) spoIVB 4101166..4102464 (-) 1299 WP_002101312.1 SpoIVB peptidase -
  QOM09_RS21040 (QOM09_21040) recN 4102583..4104322 (-) 1740 WP_053512778.1 DNA repair protein RecN Machinery gene
  QOM09_RS21045 (QOM09_21045) argR 4104587..4105036 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=838090 QOM09_RS21030 WP_021727703.1 4100081..4100875(-) (spo0A) [Bacillus thuringiensis strain DHC4]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=838090 QOM09_RS21030 WP_021727703.1 4100081..4100875(-) (spo0A) [Bacillus thuringiensis strain DHC4]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818