Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LL303_RS09805 Genome accession   NZ_CP126467
Coordinates   1930910..1931611 (-) Length   233 a.a.
NCBI ID   WP_095348227.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain 303     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1925910..1936611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL303_RS09785 (LL303_09760) - 1926020..1927237 (-) 1218 WP_023164477.1 cysteine desulfurase -
  LL303_RS09790 (LL303_09765) sufD 1927237..1928496 (-) 1260 WP_371263876.1 Fe-S cluster assembly protein SufD -
  LL303_RS09795 (LL303_09770) sufC 1928631..1929401 (-) 771 WP_023164479.1 Fe-S cluster assembly ATPase SufC -
  LL303_RS09800 (LL303_09775) - 1929576..1930907 (-) 1332 WP_023164480.1 glycosyltransferase family 4 protein -
  LL303_RS09805 (LL303_09780) mecA 1930910..1931611 (-) 702 WP_095348227.1 adaptor protein MecA Regulator
  LL303_RS09810 (LL303_09785) - 1931741..1932475 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  LL303_RS09815 (LL303_09790) - 1932475..1933161 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  LL303_RS09820 (LL303_09795) - 1933309..1934217 (-) 909 WP_023164481.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27093.50 Da        Isoelectric Point: 4.1246

>NTDB_id=838037 LL303_RS09805 WP_095348227.1 1930910..1931611(-) (mecA) [Lactococcus lactis subsp. lactis strain 303]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQELDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=838037 LL303_RS09805 WP_095348227.1 1930910..1931611(-) (mecA) [Lactococcus lactis subsp. lactis strain 303]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCTAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTCGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966