Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   QLQ03_RS04360 Genome accession   NZ_CP126456
Coordinates   790658..790798 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain KRS010     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 785658..795798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ03_RS04335 - 785980..786369 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  QLQ03_RS04340 comA 786393..787034 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QLQ03_RS04345 comP 787115..789421 (-) 2307 WP_017367961.1 ATP-binding protein Regulator
  QLQ03_RS04350 comX 789435..789605 (-) 171 WP_008345861.1 competence pheromone ComX -
  QLQ03_RS04355 - 789583..790506 (-) 924 WP_008345863.1 polyprenyl synthetase family protein -
  QLQ03_RS04360 degQ 790658..790798 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QLQ03_RS04365 - 791304..791657 (+) 354 WP_019744042.1 hypothetical protein -
  QLQ03_RS04370 - 791694..792920 (-) 1227 WP_008345870.1 HDOD domain-containing protein -
  QLQ03_RS04375 - 793061..794470 (-) 1410 WP_284565316.1 nicotinate phosphoribosyltransferase -
  QLQ03_RS04380 - 794548..795099 (-) 552 WP_144683732.1 isochorismatase family cysteine hydrolase -
  QLQ03_RS04385 - 795160..795567 (-) 408 WP_056702629.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=837888 QLQ03_RS04360 WP_003213123.1 790658..790798(-) (degQ) [Bacillus altitudinis strain KRS010]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=837888 QLQ03_RS04360 WP_003213123.1 790658..790798(-) (degQ) [Bacillus altitudinis strain KRS010]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696