Detailed information NTG0837441

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QN061_RS14035
• Genome accession: NZ_CP126305
• Coordinates: 2988545..2989549 (-)
• Length: 334 a.a.
• NCBI ID: WP_222741034.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain SD21SC3889PM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2983545..2994549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN061_RS14010 (QN061_14010)	aroK	2984413..2984931 (-)	519	WP_004728569.1	shikimate kinase AroK	-
QN061_RS14015 (QN061_14015)	pilQ	2985119..2986855 (-)	1737	WP_038127863.1	type IV pilus secretin PilQ family protein	Machinery gene
QN061_RS14020 (QN061_14020)	pilP	2986880..2987392 (-)	513	WP_020329446.1	pilus assembly protein PilP	Machinery gene
QN061_RS14025 (QN061_14025)	pilO	2987382..2987972 (-)	591	WP_020329445.1	type 4a pilus biogenesis protein PilO	Machinery gene
QN061_RS14030 (QN061_14030)	pilN	2987965..2988555 (-)	591	WP_020329444.1	PilN domain-containing protein	Machinery gene
QN061_RS14035 (QN061_14035)	pilM	2988545..2989549 (-)	1005	WP_222741034.1	type IV pilus assembly protein PilM	Machinery gene
QN061_RS14040 (QN061_14040)	-	2989692..2992172 (+)	2481	WP_020329441.1	PBP1A family penicillin-binding protein	-
QN061_RS14045 (QN061_14045)	oxyR	2992234..2993130 (-)	897	WP_020329438.1	DNA-binding transcriptional regulator OxyR	-
QN061_RS14050 (QN061_14050)	-	2993273..2994007 (+)	735	WP_020329437.1	glutathione peroxidase	-
QN061_RS14055 (QN061_14055)	-	2994136..2994399 (+)	264	WP_020329436.1	DUF3624 domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36891.21 Da
• Isoelectric Point: 6.4970

>NTDB_id=837441 QN061_RS14035 WP_222741034.1 2988545..2989549(-) (pilM) [Vibrio fluvialis strain SD21SC3889PM]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSEDIFADNHTLNYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSELDASEQEFAVYQDFSHQSPLPIEELSLDFVVTGEKTLGRSSSLTYQVYATRREVIDNRLSAVSKAGFEP
LLFDMQIHGLLNIWQWVSRAQQRTDWMLVDVGFSQTSLCIDFADKTPFYKDIPLGTRQLVAATSGGNADLTCPQAHFIQD
LVERLARQIQLFLSLQGHQPLAGIWLSGGGAATEGLAQAISERLVLPCELFNPLAEFTCRASLRRQPQADLQRFSTAAGL
ALRGLNWLENGHAA

Nucleotide

• Length: 1005 bp

>NTDB_id=837441 QN061_RS14035 WP_222741034.1 2988545..2989549(-) (pilM) [Vibrio fluvialis strain SD21SC3889PM]
ATGGGTAAATCATTAGTTACAGGTGTCGATATTGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAAGGCGAATC
GTATTCGCTGGTCGGTTACCAAGAGATAGTCGTATCCGAGGATATTTTCGCTGATAACCACACGCTGAATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTACCGCTATTTAGTCGTAAAGTGGCGCTGGCTGTACCGGACAATGCA
GTAATAAGTAAGGTATTACAGATAGATAGCGAACTGGATGCCAGCGAACAAGAGTTCGCGGTCTATCAGGATTTTTCTCA
TCAATCGCCGCTACCCATCGAAGAGTTGAGCCTGGATTTCGTTGTCACCGGAGAAAAAACACTGGGGCGCAGCAGTTCGT
TGACGTATCAGGTCTATGCAACCCGACGTGAAGTGATCGACAACCGTTTGTCTGCGGTGAGCAAAGCGGGTTTTGAGCCG
CTGCTGTTTGATATGCAGATTCACGGCCTGCTCAATATCTGGCAATGGGTCAGCCGTGCTCAGCAACGCACCGATTGGAT
GCTGGTTGATGTCGGGTTCAGTCAAACCTCATTGTGCATCGACTTTGCCGATAAAACGCCGTTTTACAAAGACATTCCGT
TGGGAACCCGCCAACTGGTTGCGGCGACCTCCGGTGGTAACGCTGACCTTACCTGCCCGCAAGCACACTTCATTCAGGAT
TTGGTTGAGCGTCTGGCGCGCCAGATCCAGCTGTTTCTTTCTCTGCAAGGCCATCAGCCGCTGGCCGGTATCTGGCTATC
CGGTGGCGGCGCGGCAACGGAAGGTTTGGCGCAGGCGATTAGCGAACGTCTGGTTCTGCCTTGCGAGCTGTTTAACCCTC
TGGCGGAGTTTACTTGCCGCGCATCGCTACGCCGCCAGCCTCAGGCTGATTTGCAGCGTTTCAGTACTGCGGCCGGCTTG
GCGCTGCGCGGCCTGAATTGGCTGGAGAACGGCCATGCTGCATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-219)

• Type IV pilus assembly protein PilM; (PilM_2) (237-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	65.192	100	0.662
pilM	Vibrio campbellii strain DS40M4	47.813	100	0.491