Detailed information NTG0837152

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QNM98_RS01995
• Genome accession: NZ_CP126226
• Coordinates: 396178..397326 (+)
• Length: 382 a.a.
• NCBI ID: WP_033575082.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B31
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391178..402326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNM98_RS01975 (QNM98_01975)	-	391576..392259 (-)	684	WP_284064797.1	ABC transporter ATP-binding protein	-
QNM98_RS01980 (QNM98_01980)	-	392274..393710 (-)	1437	WP_095352405.1	ABC transporter permease	-
QNM98_RS01985 (QNM98_01985)	-	393922..394605 (+)	684	WP_014416901.1	response regulator transcription factor	-
QNM98_RS01990 (QNM98_01990)	-	394592..396025 (+)	1434	WP_015416810.1	HAMP domain-containing sensor histidine kinase	-
QNM98_RS01995 (QNM98_01995)	rapC	396178..397326 (+)	1149	WP_033575082.1	Rap family tetratricopeptide repeat protein	Regulator
QNM98_RS02000 (QNM98_02000)	phrC	397310..397429 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QNM98_RS02005 (QNM98_02005)	-	397576..397671 (-)	96	WP_076983091.1	YjcZ family sporulation protein	-
QNM98_RS02010 (QNM98_02010)	-	397766..399130 (-)	1365	WP_033575080.1	aspartate kinase	-
QNM98_RS02015 (QNM98_02015)	ceuB	399544..400497 (+)	954	WP_061890422.1	ABC transporter permease	Machinery gene
QNM98_RS02020 (QNM98_02020)	-	400487..401434 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
QNM98_RS02025 (QNM98_02025)	-	401428..402186 (+)	759	WP_015416812.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45491.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=837152 QNM98_RS01995 WP_033575082.1 396178..397326(+) (rapC) [Bacillus velezensis strain B31]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=837152 QNM98_RS01995 WP_033575082.1 396178..397326(+) (rapC) [Bacillus velezensis strain B31]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACTTTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568