Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QNM98_RS01785 Genome accession   NZ_CP126226
Coordinates   335009..335407 (-) Length   132 a.a.
NCBI ID   WP_100261594.1    Uniprot ID   -
Organism   Bacillus velezensis strain B31     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 330009..340407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNM98_RS01760 (QNM98_01760) - 330181..331383 (+) 1203 WP_110124505.1 GTP-binding protein -
  QNM98_RS01765 (QNM98_01765) - 331448..332584 (+) 1137 WP_025284207.1 zinc-dependent alcohol dehydrogenase -
  QNM98_RS01770 (QNM98_01770) - 332599..333033 (+) 435 WP_007409358.1 RDD family protein -
  QNM98_RS01775 (QNM98_01775) - 333105..333428 (+) 324 WP_007409357.1 YckD family protein -
  QNM98_RS01780 (QNM98_01780) - 333532..334968 (+) 1437 WP_256683712.1 family 1 glycosylhydrolase -
  QNM98_RS01785 (QNM98_01785) nin/comJ 335009..335407 (-) 399 WP_100261594.1 competence protein ComJ Regulator
  QNM98_RS01790 (QNM98_01790) nucA/comI 335428..335865 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QNM98_RS01795 (QNM98_01795) hxlB 336196..336753 (-) 558 WP_256683714.1 6-phospho-3-hexuloisomerase -
  QNM98_RS01800 (QNM98_01800) hxlA 336750..337385 (-) 636 WP_015416785.1 3-hexulose-6-phosphate synthase -
  QNM98_RS01805 (QNM98_01805) - 337617..337979 (+) 363 WP_014304320.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=837149 QNM98_RS01785 WP_100261594.1 335009..335407(-) (nin/comJ) [Bacillus velezensis strain B31]
MIKSWKPQELAISYHQFTLFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=837149 QNM98_RS01785 WP_100261594.1 335009..335407(-) (nin/comJ) [Bacillus velezensis strain B31]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACACTCTTTCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758