Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QLQ22_RS05890 Genome accession   NZ_CP126116
Coordinates   1199818..1200768 (+) Length   316 a.a.
NCBI ID   WP_284016208.1    Uniprot ID   -
Organism   Metabacillus sp. CT-WN-B3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194818..1205768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ22_RS05865 (QLQ22_05865) argF 1196228..1197178 (+) 951 WP_223440356.1 ornithine carbamoyltransferase -
  QLQ22_RS05870 (QLQ22_05870) - 1197384..1197563 (+) 180 WP_223440358.1 YjzC family protein -
  QLQ22_RS05875 (QLQ22_05875) - 1197633..1197818 (-) 186 WP_223440360.1 YjzD family protein -
  QLQ22_RS05880 (QLQ22_05880) - 1198022..1198753 (+) 732 WP_284016207.1 hypothetical protein -
  QLQ22_RS05885 (QLQ22_05885) - 1198846..1199697 (+) 852 WP_223440365.1 NAD(P)-dependent oxidoreductase -
  QLQ22_RS05890 (QLQ22_05890) med 1199818..1200768 (+) 951 WP_284016208.1 BMP family ABC transporter substrate-binding protein Regulator
  QLQ22_RS05895 (QLQ22_05895) comZ 1200784..1200969 (+) 186 WP_223440367.1 ComZ family protein Regulator
  QLQ22_RS05900 (QLQ22_05900) rsgA 1201043..1202050 (-) 1008 WP_284016209.1 ribosome small subunit-dependent GTPase A -
  QLQ22_RS05905 (QLQ22_05905) - 1202283..1202540 (-) 258 WP_223440369.1 hypothetical protein -
  QLQ22_RS05910 (QLQ22_05910) - 1202707..1203639 (+) 933 WP_223440370.1 beta-ketoacyl-ACP synthase III -
  QLQ22_RS05915 (QLQ22_05915) fabF 1203677..1204918 (+) 1242 WP_223440372.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35743.13 Da        Isoelectric Point: 4.2373

>NTDB_id=836684 QLQ22_RS05890 WP_284016208.1 1199818..1200768(+) (med) [Metabacillus sp. CT-WN-B3]
MLKKSILFAICLFFLTGCGQPRQNELEKVGLLVPDTISDQVWGTKGYKGLLKIQSRYGIEVFYKEGMNNQEVVREAVKEF
SGKGVNLIFGHGSEYETFFAELNEEYDDIHFVFFNGEAKGDNMTSLNFDSNAMGFFGGMIAGEMTKTNKVGILAAYEWQP
EIDGFYEGANYQNPDVQVKIQYVQSWDDVKSALNHTDEMLAEGIDVVYPAGDGYNVPVIERIKEKGLYAIGFVSDQSDLG
EATVLTSTIQHVDLLYELVAEKYLNGELESGNLYFDFQDDVIELGKYSPNVDKSFQNKIQEHIEIYRQTDKLPNQF

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836684 QLQ22_RS05890 WP_284016208.1 1199818..1200768(+) (med) [Metabacillus sp. CT-WN-B3]
ATGCTGAAGAAAAGTATTCTTTTTGCCATATGCCTTTTTTTTCTGACAGGATGCGGACAACCAAGGCAGAATGAACTTGA
GAAAGTGGGCTTGCTTGTCCCGGATACAATCAGCGATCAAGTATGGGGCACGAAGGGATACAAAGGATTATTAAAAATAC
AATCACGTTACGGTATTGAAGTTTTTTATAAAGAAGGGATGAATAACCAAGAAGTAGTTAGAGAAGCGGTAAAAGAGTTT
TCGGGAAAAGGCGTCAATCTCATTTTCGGTCATGGCAGTGAATATGAAACTTTTTTTGCAGAATTGAATGAAGAATATGA
TGATATTCATTTTGTCTTTTTCAATGGAGAGGCAAAGGGAGATAATATGACAAGCCTTAATTTTGACTCAAATGCTATGG
GTTTTTTCGGGGGGATGATTGCCGGTGAAATGACAAAGACAAATAAAGTCGGTATACTGGCAGCTTATGAATGGCAGCCT
GAAATTGATGGTTTTTATGAGGGTGCGAACTATCAGAATCCTGATGTTCAGGTTAAAATCCAGTATGTGCAAAGCTGGGA
TGATGTAAAAAGCGCCCTTAATCATACAGATGAAATGCTTGCAGAAGGCATAGATGTTGTATATCCTGCAGGCGATGGGT
ATAATGTACCTGTCATTGAGCGGATAAAAGAGAAAGGTTTGTATGCAATTGGTTTTGTTTCCGACCAGTCAGATCTTGGC
GAAGCAACTGTCCTTACAAGTACGATCCAGCATGTAGACCTTTTATATGAGCTTGTTGCTGAAAAATATTTGAATGGTGA
GCTTGAAAGCGGAAATTTGTATTTTGATTTTCAGGATGATGTCATTGAACTCGGCAAGTACAGTCCAAATGTGGACAAGT
CCTTTCAAAATAAAATCCAAGAGCATATAGAAATATACAGGCAGACAGATAAGCTGCCTAATCAATTTTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532