Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   U7118_RS04650 Genome accession   NZ_CP141283
Coordinates   888652..889377 (+) Length   241 a.a.
NCBI ID   WP_014480811.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_09     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 883652..894377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS04630 (U7118_04630) - 884369..885703 (+) 1335 WP_014480815.1 glutathionylspermidine synthase family protein -
  U7118_RS04635 (U7118_04635) - 885703..886227 (+) 525 WP_014480814.1 GNAT family N-acetyltransferase -
  U7118_RS04640 (U7118_04640) - 886217..887458 (+) 1242 WP_014480813.1 MFS transporter -
  U7118_RS04645 (U7118_04645) - 887488..888594 (+) 1107 WP_014480812.1 methyltransferase -
  U7118_RS04650 (U7118_04650) pptA 888652..889377 (+) 726 WP_014480811.1 ABC transporter ATP-binding protein Regulator
  U7118_RS04655 (U7118_04655) - 889374..890570 (+) 1197 WP_029318434.1 ABC transporter permease -
  U7118_RS04660 (U7118_04660) - 892202..893998 (+) 1797 WP_014480806.1 M3 family oligoendopeptidase -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 27577.45 Da        Isoelectric Point: 7.9039

>NTDB_id=836685 U7118_RS04650 WP_014480811.1 888652..889377(+) (pptA) [Bacillus subtilis strain DKU_09]
MLRVEQVTGGYKRNKMANHNISFQIDKGEIVGLVGLNGAGKSTIIKHILGILKPTEGRVTLDGVSLRDDPSYFRPRISYI
PEVPQLYQELTLWEHLEFTASAYKMKREKFELKAAELLKKFRMEKKINDYPQTFSKGMQQKVMILCAFLVEAVFFIIDEP
FVGLDPLAIDTLIDLMVEMKQRGMGILVSTHILTMAEKYCDRVVFLHEGKVKVQGTIQEIQDQMKMNDVSLEEMFIGVVK
N

Nucleotide


Download         Length: 726 bp        

>NTDB_id=836685 U7118_RS04650 WP_014480811.1 888652..889377(+) (pptA) [Bacillus subtilis strain DKU_09]
ATGTTGCGCGTAGAACAGGTTACAGGAGGTTATAAGCGTAATAAGATGGCAAACCACAATATTTCTTTTCAGATTGATAA
AGGGGAAATAGTTGGTTTAGTTGGGCTAAATGGTGCGGGGAAAAGCACGATCATTAAGCACATCTTAGGTATCTTAAAAC
CCACTGAAGGCCGTGTTACACTTGATGGTGTGTCATTAAGAGATGATCCCTCCTATTTTAGGCCGCGTATTTCCTATATC
CCTGAAGTTCCTCAATTATATCAAGAATTAACTCTTTGGGAACATTTGGAATTCACTGCATCAGCTTATAAAATGAAAAG
AGAAAAATTCGAATTAAAAGCGGCCGAACTGTTAAAAAAATTTAGAATGGAAAAAAAAATAAATGATTACCCGCAGACTT
TTTCGAAGGGGATGCAACAAAAGGTTATGATTCTTTGTGCCTTCTTGGTTGAAGCAGTTTTCTTTATTATTGATGAACCC
TTTGTTGGGCTAGACCCTTTAGCAATTGATACATTAATTGATTTAATGGTTGAAATGAAACAGAGGGGAATGGGAATCCT
TGTTTCTACTCATATTTTAACTATGGCTGAAAAATATTGTGACCGTGTTGTTTTCTTACATGAGGGAAAGGTTAAGGTGC
AAGGAACCATTCAGGAAATTCAAGATCAGATGAAAATGAATGATGTTTCATTAGAAGAAATGTTTATTGGGGTTGTGAAA
AATTGA

Domains


Predicted by InterProScan.

(19-161)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

48.548

100

0.485

  pptA Streptococcus thermophilus LMD-9

48.548

100

0.485