Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   U5072_RS16710 Genome accession   NZ_CP141222
Coordinates   3869293..3870414 (-) Length   373 a.a.
NCBI ID   WP_031136173.1    Uniprot ID   A0A1D8G486
Organism   Streptomyces sp. SS162     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3864293..3875414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U5072_RS16690 (U5072_16690) - 3864944..3865669 (-) 726 WP_331453068.1 SigE family RNA polymerase sigma factor -
  U5072_RS16695 (U5072_16695) - 3866155..3867114 (-) 960 WP_249467631.1 A/G-specific adenine glycosylase -
  U5072_RS16700 (U5072_16700) - 3867384..3868076 (-) 693 WP_037939586.1 phosphatase PAP2 family protein -
  U5072_RS16705 (U5072_16705) - 3868246..3869133 (+) 888 WP_331453069.1 hypothetical protein -
  U5072_RS16710 (U5072_16710) disA 3869293..3870414 (-) 1122 WP_031136173.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  U5072_RS16715 (U5072_16715) radA/sms 3870738..3872141 (-) 1404 WP_031136171.1 DNA repair protein RadA Machinery gene
  U5072_RS16720 (U5072_16720) - 3872350..3874395 (+) 2046 WP_331453070.1 hypothetical protein -
  U5072_RS16725 (U5072_16725) - 3874472..3875296 (-) 825 WP_331454005.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40188.06 Da        Isoelectric Point: 5.0196

>NTDB_id=836559 U5072_RS16710 WP_031136173.1 3869293..3870414(-) (disA) [Streptomyces sp. SS162]
MAANDRATPGKSGGGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLNVEFTATRLRE
LCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVISVSQSMRLIALYVDGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHAELLELPTVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGAI
IERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=836559 U5072_RS16710 WP_031136173.1 3869293..3870414(-) (disA) [Streptomyces sp. SS162]
GTGGCAGCCAACGACCGGGCAACACCCGGAAAGTCGGGCGGAGGCTCCGGCAACGAAGCGCTGATGCGCGCGTCCCTCAG
TGCGGTCGCCCCCGGCACGGCGCTGCGGGACGGACTGGAGCGCATCCTCCGCGGCAACACGGGCGGTCTGATCGTCCTCG
GCATGGACAAGACGGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGAACGTCGAGTTCACCGCGACCCGTCTGCGCGAG
CTGTGCAAGCTCGACGGCGCGCTCATCCTGGACAAGGACATCACCAAGATCCTGCGCGCCGGTGTCCAGCTCGTGCCCGA
CGCGTCCATCCCGACCGAGGAGACCGGCACACGGCACCGCACGGCGGACCGGGTGTCCAGGCAGTGCGGCTTCCCCGTGA
TCTCCGTGTCCCAGTCGATGCGGCTGATCGCCCTCTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCCGCCGCGATC
CTGTCGCGGGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCCGGGACGCTCTCCGC
GCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCACGGCCGTGGCGCAGCGGCTGGAGATGGTCCGCCGCATCGCCA
CGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGGCGCCTCCTCGCCCTCCAGTTGGACGAGCTGATCGCGGGT
GTGGAGCCCGAGCGGGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGAGGC
GCTGACCGAGCTGGACGCCCTGTCGCACGCCGAGCTGCTGGAGCTGCCGACGGTGGCCCGCGCCCTCGGCTACAGCGGCT
CGCCCGAGACCCTCGACTCGGCCGTGTCGCCGCGCGGCTACCGCCTGCTGGCGAAGGTGCCGCGCCTGCCCGGCGCGATC
ATCGAGCGGCTCGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCGAGTGTGGACGACCTCCAGACCGTGGACGG
CGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCCGAGTCCTCGATCCTCGAACGCTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1D8G486

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.783

0.448