Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH20_RS07505 Genome accession   NZ_CP126110
Coordinates   1601295..1601483 (+) Length   62 a.a.
NCBI ID   WP_283923366.1    Uniprot ID   A0AA95S8Y6
Organism   Neobacillus sp. WH10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1596295..1606483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH20_RS07485 (QNH20_07485) - 1598115..1598300 (-) 186 WP_283922268.1 YjzD family protein -
  QNH20_RS07490 (QNH20_07490) - 1598486..1599208 (+) 723 WP_283922269.1 hydrolase -
  QNH20_RS07495 (QNH20_07495) - 1599290..1600123 (+) 834 WP_283922270.1 hypothetical protein -
  QNH20_RS07500 (QNH20_07500) med 1600327..1601274 (+) 948 WP_283922271.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH20_RS07505 (QNH20_07505) comZ 1601295..1601483 (+) 189 WP_283923366.1 ComZ family protein Regulator
  QNH20_RS07510 (QNH20_07510) - 1601513..1601809 (-) 297 WP_283922272.1 hypothetical protein -
  QNH20_RS07515 (QNH20_07515) - 1602016..1602948 (+) 933 WP_283922273.1 beta-ketoacyl-ACP synthase III -
  QNH20_RS07520 (QNH20_07520) fabF 1603138..1604376 (+) 1239 WP_283922274.1 beta-ketoacyl-ACP synthase II -
  QNH20_RS07525 (QNH20_07525) - 1604652..1605422 (+) 771 WP_283922275.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7277.40 Da        Isoelectric Point: 4.1605

>NTDB_id=836434 QNH20_RS07505 WP_283923366.1 1601295..1601483(+) (comZ) [Neobacillus sp. WH10]
MNQDKTLQFMQIAMKYLPEAKEQLDQAGVELSMELIQPFMNLFTKVMQEAYELGREDAFSEK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=836434 QNH20_RS07505 WP_283923366.1 1601295..1601483(+) (comZ) [Neobacillus sp. WH10]
ATTAATCAAGATAAGACCTTACAATTTATGCAGATTGCGATGAAATACTTACCAGAAGCAAAAGAGCAATTAGATCAAGC
AGGCGTAGAATTATCGATGGAGTTAATTCAGCCATTTATGAATTTGTTTACAAAAGTGATGCAAGAAGCCTATGAACTTG
GCAGGGAAGATGCCTTTAGTGAAAAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.77

98.387

0.726