Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QNH20_RS07500 Genome accession   NZ_CP126110
Coordinates   1600327..1601274 (+) Length   315 a.a.
NCBI ID   WP_283922271.1    Uniprot ID   A0AA95MHR1
Organism   Neobacillus sp. WH10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1595327..1606274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH20_RS07480 (QNH20_07480) clpB 1595471..1598065 (+) 2595 WP_283922267.1 ATP-dependent chaperone ClpB -
  QNH20_RS07485 (QNH20_07485) - 1598115..1598300 (-) 186 WP_283922268.1 YjzD family protein -
  QNH20_RS07490 (QNH20_07490) - 1598486..1599208 (+) 723 WP_283922269.1 hydrolase -
  QNH20_RS07495 (QNH20_07495) - 1599290..1600123 (+) 834 WP_283922270.1 hypothetical protein -
  QNH20_RS07500 (QNH20_07500) med 1600327..1601274 (+) 948 WP_283922271.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH20_RS07505 (QNH20_07505) comZ 1601295..1601483 (+) 189 WP_283923366.1 ComZ family protein Regulator
  QNH20_RS07510 (QNH20_07510) - 1601513..1601809 (-) 297 WP_283922272.1 hypothetical protein -
  QNH20_RS07515 (QNH20_07515) - 1602016..1602948 (+) 933 WP_283922273.1 beta-ketoacyl-ACP synthase III -
  QNH20_RS07520 (QNH20_07520) fabF 1603138..1604376 (+) 1239 WP_283922274.1 beta-ketoacyl-ACP synthase II -
  QNH20_RS07525 (QNH20_07525) - 1604652..1605422 (+) 771 WP_283922275.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34983.73 Da        Isoelectric Point: 6.1627

>NTDB_id=836433 QNH20_RS07500 WP_283922271.1 1600327..1601274(+) (med) [Neobacillus sp. WH10]
MLNRFGIILLCLLLLGACGGTKPTGKLQKVGLLVPETVNDQVWGTKGYKGMLKIQSKFNVDVFYKEGMISQAVVERAVAE
FEQKGVNLIFGHGSEYAEYFNNISKDYPQMHFVSFNGDAKNSNTTSLNFKSHAMGFFGGMVAAHMSKTNKVGVLAAYEWQ
PEIEGFYQGAMTENKHTHVSIEYVGNWDDEKKAVQLANQMLENGVDVVYPAGDGFNVPVIEQVKGQGSYVIGYVSDQSDL
GESTVLTSTIQQVDTLYEKVAEQYNDGKLKSGNLSFDFQDDVISLGKYSPLVSKDFIRKMNKHIEQYKETGKLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=836433 QNH20_RS07500 WP_283922271.1 1600327..1601274(+) (med) [Neobacillus sp. WH10]
ATGTTAAACCGTTTCGGAATCATTCTTTTATGTCTTCTTTTACTTGGGGCTTGCGGGGGAACAAAGCCGACAGGCAAATT
ACAAAAGGTTGGCTTGTTAGTTCCCGAAACAGTTAATGACCAAGTATGGGGAACAAAAGGCTATAAGGGAATGCTAAAAA
TACAATCCAAATTTAATGTGGATGTATTTTATAAAGAAGGAATGATTTCACAAGCTGTTGTAGAACGGGCAGTGGCGGAG
TTTGAGCAAAAAGGGGTCAATCTAATTTTTGGCCATGGTTCGGAGTATGCAGAATACTTTAACAATATTTCAAAAGACTA
TCCTCAGATGCATTTTGTCAGTTTTAACGGTGATGCAAAAAATTCCAACACAACCAGCCTTAACTTTAAATCACACGCCA
TGGGTTTTTTTGGTGGAATGGTTGCTGCCCATATGTCTAAAACTAATAAAGTAGGTGTTTTAGCTGCATATGAATGGCAG
CCGGAAATTGAAGGCTTTTACCAAGGTGCAATGACTGAAAATAAACATACTCATGTAAGTATAGAATATGTCGGAAATTG
GGATGACGAAAAAAAGGCCGTTCAATTAGCCAATCAAATGTTGGAAAACGGGGTTGATGTGGTTTATCCAGCTGGGGATG
GTTTTAATGTTCCCGTTATTGAGCAGGTAAAGGGACAAGGTTCCTATGTAATCGGCTATGTCTCTGACCAGTCTGACTTA
GGTGAGTCAACTGTATTAACTAGCACAATTCAACAGGTTGACACCTTATATGAAAAGGTAGCAGAACAATACAACGATGG
AAAGCTAAAATCAGGTAACCTTTCTTTTGATTTTCAAGACGATGTTATTTCCCTTGGAAAATATAGTCCATTAGTATCTA
AAGATTTTATTAGAAAAATGAATAAGCATATTGAGCAATATAAGGAAACAGGAAAACTGCCTAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.556

100

0.556