Detailed information NTG0836339

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SJJ41_RS24535
• Genome accession: NZ_CP141102
• Coordinates: 5342419..5343717 (+)
• Length: 432 a.a.
• NCBI ID: WP_099172566.1
• Uniprot ID: A0ABU8A0E2
• Organism: Streptomyces sp. S584
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5337419..5348717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJJ41_RS24500	-	5337907..5338101 (+)	195	WP_073746901.1	hypothetical protein	-
SJJ41_RS24505	-	5338296..5338643 (+)	348	WP_129262945.1	DUF1330 domain-containing protein	-
SJJ41_RS24520	tig	5339211..5340614 (+)	1404	WP_322985233.1	trigger factor	-
SJJ41_RS24525	-	5340906..5341511 (+)	606	WP_099172994.1	ATP-dependent Clp protease proteolytic subunit	-
SJJ41_RS24530	clpP	5341579..5342262 (+)	684	WP_031091966.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SJJ41_RS24535	clpX	5342419..5343717 (+)	1299	WP_099172566.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SJJ41_RS24540	-	5343787..5344797 (-)	1011	WP_322985234.1	hypothetical protein	-
SJJ41_RS24545	-	5344935..5347556 (+)	2622	WP_322985235.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47329.15 Da
• Isoelectric Point: 4.8249

>NTDB_id=836339 SJJ41_RS24535 WP_099172566.1 5342419..5343717(+) (clpX) [Streptomyces sp. S584]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYDVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=836339 SJJ41_RS24535 WP_099172566.1 5342419..5343717(+) (clpX) [Streptomyces sp. S584]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCGAATCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGTCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTATCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
GAAGGGTATCGGCTTCGGGGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAAAGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGACGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
CCGGACGTCGTGCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.37	0.507