Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   SJJ41_RS20195 Genome accession   NZ_CP141102
Coordinates   4384228..4385352 (-) Length   374 a.a.
NCBI ID   WP_099173610.1    Uniprot ID   A0ABU8A2T9
Organism   Streptomyces sp. S584     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4379228..4390352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SJJ41_RS20170 cseB 4379935..4380645 (-) 711 WP_124277577.1 two-component system response regulator CseB -
  SJJ41_RS20175 - 4380657..4381355 (-) 699 WP_315985667.1 hypothetical protein -
  SJJ41_RS20180 - 4381343..4381927 (-) 585 WP_147983522.1 SigE family RNA polymerase sigma factor -
  SJJ41_RS20185 - 4382111..4383013 (-) 903 WP_322984718.1 A/G-specific adenine glycosylase -
  SJJ41_RS20190 - 4383273..4384109 (+) 837 WP_322986829.1 hypothetical protein -
  SJJ41_RS20195 disA 4384228..4385352 (-) 1125 WP_099173610.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  SJJ41_RS20200 radA/sms 4385433..4386845 (-) 1413 WP_099173611.1 DNA repair protein RadA Machinery gene
  SJJ41_RS20205 - 4387032..4388792 (+) 1761 WP_416316234.1 BACON domain-containing protein -
  SJJ41_RS20210 - 4388899..4389741 (-) 843 WP_099173613.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40296.19 Da        Isoelectric Point: 4.8697

>NTDB_id=836327 SJJ41_RS20195 WP_099173610.1 4384228..4385352(-) (disA) [Streptomyces sp. S584]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVDFAATRLR
ELCKLDGAMILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDTLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=836327 SJJ41_RS20195 WP_099173610.1 4384228..4385352(-) (disA) [Streptomyces sp. S584]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGGACGGCCCTCCGCGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGACTGATCGTCC
TCGGCATGGACAAGACCGTCGAATCCATGTGTACGGGCGGTTTCGTGCTCGACGTGGATTTCGCCGCGACGCGCCTGCGC
GAACTGTGCAAGCTGGACGGCGCGATGATCCTCGACAAGGACATGACGAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCGACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCCACCCTTGAGCGGTACAAGCTCAGGCTGGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTCTCGCAGCGGCTGGAGATGGTCCGCCGCATCG
CGACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGCCGCCTTCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCCGAGCCCACCGCGAAGCGGTCGCGTACGGTCGACGA
GGCGCTGGCCGAGCTGGACACGCTCACCCACACCGAGCTGCTCGAACTCCCCGTGGTGGCACGCGCCCTGGGCTACAGCG
GCTCCCCGGAGACGCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTCCCCGGAGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGGCCGTGGA
CGGGGTCGGCGAGGCACGGGCCCGCAGCGTCCGGGAGGGACTCTCGCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436