Detailed information NTG0836128

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNH19_RS17090
• Genome accession: NZ_CP126104
• Coordinates: 3462078..3463241 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain MB7_B11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3457078..3468241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH19_RS17060 (QNH19_17060)	-	3457341..3457760 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
QNH19_RS17065 (QNH19_17065)	comFC	3457834..3458523 (-)	690	WP_197200179.1	double zinc ribbon domain-containing protein	Machinery gene
QNH19_RS17070 (QNH19_17070)	-	3458529..3458813 (-)	285	WP_007407481.1	competence protein ComFB	-
QNH19_RS17075 (QNH19_17075)	comFA	3458871..3460256 (-)	1386	WP_283887278.1	DEAD/DEAH box helicase	Machinery gene
QNH19_RS17080 (QNH19_17080)	-	3460366..3461214 (-)	849	WP_003151387.1	DegV family protein	-
QNH19_RS17085 (QNH19_17085)	degU	3461312..3462001 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QNH19_RS17090 (QNH19_17090)	degS	3462078..3463241 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QNH19_RS17095 (QNH19_17095)	-	3463464..3464111 (+)	648	WP_061581228.1	YigZ family protein	-
QNH19_RS17100 (QNH19_17100)	-	3464116..3465336 (+)	1221	WP_160223301.1	LCP family protein	-
QNH19_RS17105 (QNH19_17105)	-	3465435..3466511 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QNH19_RS17110 (QNH19_17110)	-	3466644..3467840 (-)	1197	WP_283887283.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=836128 QNH19_RS17090 WP_007407484.1 3462078..3463241(-) (degS) [Bacillus velezensis strain MB7_B11]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=836128 QNH19_RS17090 WP_007407484.1 3462078..3463241(-) (degS) [Bacillus velezensis strain MB7_B11]
ATGAATAAATCGAAGATGGACTCCAAAGTATTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951