Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   QNH19_RS15040 Genome accession   NZ_CP126104
Coordinates   3062274..3062918 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain MB7_B11     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3057274..3067918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH19_RS15005 (QNH19_15005) - 3058459..3058890 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  QNH19_RS15010 (QNH19_15010) - 3058890..3059231 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  QNH19_RS15015 (QNH19_15015) - 3059224..3060705 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  QNH19_RS15020 (QNH19_15020) - 3060711..3061187 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  QNH19_RS15025 (QNH19_15025) - 3061187..3061471 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  QNH19_RS15030 (QNH19_15030) mnhG 3061455..3061829 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QNH19_RS15035 (QNH19_15035) - 3061869..3062252 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  QNH19_RS15040 (QNH19_15040) comA 3062274..3062918 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  QNH19_RS15045 (QNH19_15045) comP 3062999..3065299 (-) 2301 WP_283887092.1 histidine kinase Regulator
  QNH19_RS15050 (QNH19_15050) comX 3065313..3065486 (-) 174 WP_012118314.1 competence pheromone ComX -
  QNH19_RS15055 (QNH19_15055) - 3065455..3066315 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  QNH19_RS15060 (QNH19_15060) degQ 3066523..3066663 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QNH19_RS15065 (QNH19_15065) - 3067128..3067469 (+) 342 WP_069006914.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=836120 QNH19_RS15040 WP_003152052.1 3062274..3062918(-) (comA) [Bacillus velezensis strain MB7_B11]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=836120 QNH19_RS15040 WP_003152052.1 3062274..3062918(-) (comA) [Bacillus velezensis strain MB7_B11]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAGCAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCTCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCCCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864