Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH44_RS07060 Genome accession   NZ_CP126102
Coordinates   1329222..1329410 (+) Length   62 a.a.
NCBI ID   WP_283914187.1    Uniprot ID   -
Organism   Cytobacillus firmus strain LN5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1324222..1334410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH44_RS07040 (QNH44_07040) - 1326108..1326299 (-) 192 WP_048010975.1 DUF2929 family protein -
  QNH44_RS07045 (QNH44_07045) - 1326481..1327218 (+) 738 WP_163143779.1 alpha/beta hydrolase -
  QNH44_RS07050 (QNH44_07050) - 1327299..1328126 (+) 828 WP_227886532.1 hypothetical protein -
  QNH44_RS07055 (QNH44_07055) med 1328236..1329192 (+) 957 WP_258750006.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH44_RS07060 (QNH44_07060) comZ 1329222..1329410 (+) 189 WP_283914187.1 ComZ family protein Regulator
  QNH44_RS07065 (QNH44_07065) - 1329464..1329850 (-) 387 WP_227886534.1 hypothetical protein -
  QNH44_RS07070 (QNH44_07070) - 1330065..1330997 (+) 933 WP_258750007.1 beta-ketoacyl-ACP synthase III -
  QNH44_RS07075 (QNH44_07075) fabF 1331044..1332282 (+) 1239 WP_258750008.1 beta-ketoacyl-ACP synthase II -
  QNH44_RS07080 (QNH44_07080) - 1332521..1333186 (+) 666 WP_053071383.1 DUF2268 domain-containing putative Zn-dependent protease -
  QNH44_RS07085 (QNH44_07085) - 1333334..1334359 (+) 1026 WP_048010966.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7250.40 Da        Isoelectric Point: 3.9646

>NTDB_id=835986 QNH44_RS07060 WP_283914187.1 1329222..1329410(+) (comZ) [Cytobacillus firmus strain LN5]
MNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFIKVMNEAYEIGKTDALNESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=835986 QNH44_RS07060 WP_283914187.1 1329222..1329410(+) (comZ) [Cytobacillus firmus strain LN5]
ATGAACGAAAAAAACATGGAATTCATGCAAATCGCAATGAAATACTTGCCAGAAGCCAAACAGCAGCTTGACGAAGCAGG
CATCGAACTATCCATGGAAATGATCCAGCCATTCATGAACCTATTCATCAAAGTTATGAACGAAGCCTATGAAATAGGCA
AAACGGATGCTTTGAATGAGAGTGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

98.387

0.71