Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QNH41_RS16810 Genome accession   NZ_CP126100
Coordinates   3245886..3248183 (-) Length   765 a.a.
NCBI ID   WP_255001792.1    Uniprot ID   -
Organism   Bacillus halotolerans strain LN2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3240886..3253183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH41_RS16770 (QNH41_16770) - 3241354..3241785 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  QNH41_RS16775 (QNH41_16775) - 3241785..3242126 (+) 342 WP_024122674.1 Na(+)/H(+) antiporter subunit C -
  QNH41_RS16780 (QNH41_16780) - 3242119..3243600 (+) 1482 WP_024122675.1 Na+/H+ antiporter subunit D -
  QNH41_RS16785 (QNH41_16785) - 3243606..3244082 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  QNH41_RS16790 (QNH41_16790) - 3244082..3244366 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  QNH41_RS16795 (QNH41_16795) mnhG 3244350..3244724 (+) 375 WP_255001787.1 monovalent cation/H(+) antiporter subunit G -
  QNH41_RS16800 (QNH41_16800) - 3244763..3245143 (-) 381 WP_283912554.1 hotdog fold thioesterase -
  QNH41_RS16805 (QNH41_16805) comA 3245161..3245805 (-) 645 WP_168748642.1 two-component system response regulator ComA Regulator
  QNH41_RS16810 (QNH41_16810) comP 3245886..3248183 (-) 2298 WP_255001792.1 histidine kinase Regulator
  QNH41_RS16815 (QNH41_16815) comX 3248191..3248352 (-) 162 WP_255001794.1 competence pheromone ComX -
  QNH41_RS16820 (QNH41_16820) - 3248367..3249227 (-) 861 WP_255001796.1 polyprenyl synthetase family protein -
  QNH41_RS16825 (QNH41_16825) degQ 3249412..3249552 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  QNH41_RS16830 (QNH41_16830) - 3250013..3250381 (+) 369 WP_106019478.1 hypothetical protein -
  QNH41_RS16835 (QNH41_16835) - 3250357..3251586 (-) 1230 WP_255001801.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88526.03 Da        Isoelectric Point: 7.5604

>NTDB_id=835915 QNH41_RS16810 WP_255001792.1 3245886..3248183(-) (comP) [Bacillus halotolerans strain LN2]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDLVKSINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFILKINESKDLLSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVVIYFCIILIKNKDTEQAHIIKVLTVINIFSFAPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQLIRDSTFLTQVFEELKNTILEVSLVSRAYVYEVSADGSIKLYDDETVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVGFD
QEKTNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=835915 QNH41_RS16810 WP_255001792.1 3245886..3248183(-) (comP) [Bacillus halotolerans strain LN2]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGGGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGCGGAATAGAAAAAGGGGATCTCGTAAAGAGTATTAATAATCAAAAAATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTAAGTTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACCTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATATTAA
AAATAAATGAATCGAAGGATTTACTATCTGCTTTAGTTTTAATTATATTTTTGTTATCTGCTTCTATTGCTTATATAAGC
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTATCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTAGTACCGA
TCATAAATGTAGTGTGTGAAATGTTTCGTTCACATCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCTTTT
TTCTTTTTATTTATCATAGTAGTGATTTATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTCCTCACTGTTATTAATATCTTTTCTTTTGCACCTTTTTTGTGTTTATATTTGATACCTTATGTGTTTCTAAATG
CGCACTATGTTTCTTCCTTTTTAGCAGCTTCATTTATGATGTTAATACCTTTCTCCTTGGTATTTCAATTTATGACAAAT
AAAATCTATAATGTGGATTTTATTTTAAGCAGATTAAGATATTATGGCTTTTTAGCTTTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACATTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGGTTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAT
AGTATATATAAATTTACGCAGCTGATTAGAGACTCAACATTCCTGACTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTAGTTAGCCGAGCATATGTATATGAAGTTTCAGCAGACGGAAGTATTAAGCTATATGATGATGAGACCG
TAAATTCATTCGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGAAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGCGGAAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCGTCT
TACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCGTTTTATACAAACGTATCGATTGAAAACGTCATGAAAATCGAAG
AGCTGATGAGTCATTTAGAAGAAATAAAACAACAGGAATCAAACCCCGTTTGGCTCAAAAAACTCATGTACACGATCGAA
GAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAACGGCAGTGTGA
GCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTGCAGATGAATGAGC
AGATGTCTGATGTAATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGACTGGTG
AAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGCTTAAATACCGGCAGATTTACGGC
GTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCGAATGCAGTGAAACACTCTCAGG
CGACGGAAGTGCTTATTATGCTGATTAGCATTCAAAACAAAATTGTTCTTCATTATGAGGACGATGGTGTGGGATTTGAT
CAAGAGAAAACCAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGGACGCCT
CCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.808

100

0.593