Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH41_RS02195 Genome accession   NZ_CP126100
Coordinates   433175..434125 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus halotolerans strain LN2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 428175..439125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH41_RS02170 (QNH41_02170) rapC 429564..430712 (+) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator
  QNH41_RS02175 (QNH41_02175) phrC 430696..430818 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QNH41_RS02180 (QNH41_02180) - 430923..431015 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  QNH41_RS02185 (QNH41_02185) - 431162..431272 (-) 111 WP_106021023.1 YjcZ family sporulation protein -
  QNH41_RS02190 (QNH41_02190) - 431425..432789 (-) 1365 WP_095714086.1 aspartate kinase -
  QNH41_RS02195 (QNH41_02195) ceuB 433175..434125 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  QNH41_RS02200 (QNH41_02200) yclO 434118..435065 (+) 948 WP_283912788.1 petrobactin ABC transporter permease YclO -
  QNH41_RS02205 (QNH41_02205) yclP 435059..435817 (+) 759 WP_283912789.1 petrobactin ABC transporter ATP-binding protein YclP -
  QNH41_RS02210 (QNH41_02210) - 435839..436792 (+) 954 WP_283912790.1 siderophore ABC transporter substrate-binding protein -
  QNH41_RS02215 (QNH41_02215) - 436840..438258 (-) 1419 WP_095714088.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=835862 QNH41_RS02195 WP_010333025.1 433175..434125(+) (ceuB) [Bacillus halotolerans strain LN2]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835862 QNH41_RS02195 WP_010333025.1 433175..434125(+) (ceuB) [Bacillus halotolerans strain LN2]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGACTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACATCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCAATTTACAGAGGAGACAACCTGAAAAACAGCCTGCCACACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538