Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QNH45_RS21445 Genome accession   NZ_CP126099
Coordinates   4117694..4118488 (-) Length   264 a.a.
NCBI ID   WP_033656399.1    Uniprot ID   A0A6I0BK65
Organism   Bacillus wiedmannii strain LN15     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4112694..4123488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH45_RS21420 (QNH45_21420) - 4113662..4113895 (+) 234 WP_064474833.1 DUF2627 domain-containing protein -
  QNH45_RS21425 (QNH45_21425) - 4113946..4114674 (-) 729 WP_283882644.1 glycerophosphodiester phosphodiesterase -
  QNH45_RS21430 (QNH45_21430) - 4114725..4114871 (+) 147 WP_001247671.1 YycC family protein -
  QNH45_RS21435 (QNH45_21435) - 4115058..4116584 (-) 1527 WP_283882646.1 glycosyltransferase family 39 protein -
  QNH45_RS21440 (QNH45_21440) - 4116878..4117441 (-) 564 WP_283882648.1 PRK06770 family protein -
  QNH45_RS21445 (QNH45_21445) spo0A 4117694..4118488 (-) 795 WP_033656399.1 sporulation transcription factor Spo0A Regulator
  QNH45_RS21450 (QNH45_21450) spoIVB 4118776..4120074 (-) 1299 WP_283882650.1 SpoIVB peptidase -
  QNH45_RS21455 (QNH45_21455) recN 4120193..4121932 (-) 1740 WP_098815592.1 DNA repair protein RecN Machinery gene
  QNH45_RS21460 (QNH45_21460) argR 4122198..4122647 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.13 Da        Isoelectric Point: 7.1176

>NTDB_id=835834 QNH45_RS21445 WP_033656399.1 4117694..4118488(-) (spo0A) [Bacillus wiedmannii strain LN15]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=835834 QNH45_RS21445 WP_033656399.1 4117694..4118488(-) (spo0A) [Bacillus wiedmannii strain LN15]
GTGGAAAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTACGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGCTGAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCGTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTATTTAAGGGAAGCGATCTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I0BK65

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814