Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   QNH45_RS05810 Genome accession   NZ_CP126099
Coordinates   1128458..1132183 (+) Length   1241 a.a.
NCBI ID   WP_283884580.1    Uniprot ID   A0AA95LUR9
Organism   Bacillus wiedmannii strain LN15     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1123458..1137183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH45_RS05795 (QNH45_05795) - 1123475..1124068 (+) 594 WP_000347517.1 TVP38/TMEM64 family protein -
  QNH45_RS05800 (QNH45_05800) lepB 1124266..1124829 (+) 564 WP_000751908.1 signal peptidase I -
  QNH45_RS05805 (QNH45_05805) addB 1124946..1128461 (+) 3516 WP_283884578.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  QNH45_RS05810 (QNH45_05810) addA 1128458..1132183 (+) 3726 WP_283884580.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  QNH45_RS05815 (QNH45_05815) - 1132196..1132483 (+) 288 WP_283884581.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  QNH45_RS05820 (QNH45_05820) gerPF 1132564..1132779 (-) 216 WP_001141570.1 spore germination protein GerPF -
  QNH45_RS05825 (QNH45_05825) - 1132821..1133207 (-) 387 WP_283884582.1 spore germination protein GerPE -
  QNH45_RS05830 (QNH45_05830) gerPD 1133223..1133417 (-) 195 WP_001102342.1 spore germination protein GerPD -
  QNH45_RS05835 (QNH45_05835) gerPC 1133424..1134038 (-) 615 WP_283884583.1 spore germination protein GerPC -
  QNH45_RS05840 (QNH45_05840) gerPB 1134107..1134313 (-) 207 WP_048559586.1 spore germination protein GerPB -
  QNH45_RS05845 (QNH45_05845) gerPA 1134328..1134549 (-) 222 WP_001111187.1 spore germination protein GerPA -
  QNH45_RS05850 (QNH45_05850) - 1134643..1134822 (-) 180 WP_000462847.1 aspartyl-phosphate phosphatase Spo0E family protein -
  QNH45_RS05855 (QNH45_05855) - 1135069..1135968 (+) 900 WP_283884584.1 fumarylacetoacetate hydrolase family protein -
  QNH45_RS05860 (QNH45_05860) - 1136002..1136286 (-) 285 WP_283884585.1 hypothetical protein -

Sequence


Protein


Download         Length: 1241 a.a.        Molecular weight: 142584.75 Da        Isoelectric Point: 4.8476

>NTDB_id=835816 QNH45_RS05810 WP_283884580.1 1128458..1132183(+) (addA) [Bacillus wiedmannii strain LN15]
MIENWPEKPEGSQWTDDQWKAVVANGRDILVAAAAGSGKTAVLVERIIKKIINEENPVDVDRLLVVTFTNAAAQEMKNRI
GEALEKVLIDEPGSQHVRKQLSLLNKASISTIHSFCLQVIRGYYYMLDVDPRFRIANQTENELLKEEVLDDILEEEYGIE
DNSIFFELVDRYTSDRSDDDLQRMILALHTESRAHPNPEKWLDKLVEAYDVEGKTIEDLVYASYLLEDVKFQLETAEAHI
RKATELAMLPDGPVPRVETLQADAVLLGTLSSAACESWTSVYEAMQNVSWQTLKRIKKSDYNEDVVKQVDSLRNKAKDEV
KKLQEELFSRRPESFLRDFQDMHPVLEKLVQLVKVFTGRFQAMKRDKGMVDFTDLEHFCLQILSEQSENGEMKPSAVALQ
YRNKFAEVLVDEYQDTNFVQESIIKFVTKDSESEGNLFMVGDVKQSIYRFRLAEPGLFLGKYKRFTQEGSGGGMKIDLAK
NFRSRHEVLAGTNFIFKQIMGEEVGEIDYDADAELKLGASYPDGEDVAAELLCIQQTEEEVLDGEEGAEVEKAQLEARLM
AQRIKAMVDSGYEVYDRKNDSMRPVQYRDFVILLRSMPWAPQIMEELKLQGIPVYADLATGYFEATEVNIMMNVFRVIDN
PMQDIPLAAVLRSPIVGLNDEELATLRAHGKKGSFYEVMSSFLKGAPLEEEQELHDKLQWFYNLLQGWREFARQQSLSDL
IWKVYGETGYYDFVGGLPAGKQRQANLRVLYDRARQYEATSFRGLFRFLRFIERILERGDDMGTARALGEQEDVVRIMTI
HKSKGLEFPVVFVAGLGRRFNTQDLMKRFLLHKDFGFGSQFIDPRKRIKYTTLSQLAIKRKMKMELIAEEMRVLYVALTR
AKEKLILIGTVKDANKEMEKWLDAREHSEWLLPDHIRAGASCYLDWIAPSLYRHRDSEMLLELGQGSIPGEIYGYDTSWK
VEVVDGKTLFAPEPVQEEKQELLEALREKKAVPLQSERKEEVYDRLMWKYGYEEATSHRAKQSVTEIKRNYQSEEGSDNA
FIKKLRAPIKTRPRFMEKKGLTYAERGTAVHAVMQHVDLKKPITEEVIREQIAGMVNKELLTFEQAEEVAIEKVISFFDS
DLGKRVLAAKSVEREVPFTMMLAAEEAYQDWQGKSDETILVQGVIDCMIEEEDGITLIDFKTDTIEGKFPGGFDQAKPIL
EDRYKVQLSLYAKALEKSLQHPVKEKCLYFFDGNHVVKIEE

Nucleotide


Download         Length: 3726 bp        

>NTDB_id=835816 QNH45_RS05810 WP_283884580.1 1128458..1132183(+) (addA) [Bacillus wiedmannii strain LN15]
ATGATTGAAAATTGGCCTGAAAAACCAGAAGGTAGTCAGTGGACGGATGACCAGTGGAAAGCGGTTGTAGCGAACGGACG
TGATATATTAGTCGCGGCAGCAGCTGGATCAGGGAAAACAGCAGTATTAGTTGAACGTATTATTAAAAAGATTATAAATG
AAGAAAATCCAGTCGATGTCGACCGCCTGCTCGTTGTAACATTTACGAATGCAGCGGCGCAAGAGATGAAAAACAGAATT
GGGGAAGCGTTAGAAAAGGTATTAATTGATGAGCCAGGATCGCAGCACGTAAGAAAGCAGCTTAGCTTATTAAATAAAGC
TTCTATTTCGACAATCCATTCATTTTGTTTACAAGTAATTAGAGGATATTATTACATGCTTGATGTGGATCCTCGTTTCC
GCATTGCGAATCAAACAGAAAATGAACTGTTAAAAGAAGAAGTATTAGATGACATATTAGAAGAAGAGTACGGAATTGAA
GATAATAGTATTTTCTTTGAACTCGTTGACCGTTATACGAGTGACCGTAGTGATGACGACTTACAGCGTATGATTTTAGC
GCTTCATACAGAATCAAGAGCGCATCCAAATCCGGAAAAATGGCTCGATAAATTAGTAGAAGCATACGACGTGGAAGGAA
AGACAATTGAAGATTTAGTGTACGCTTCTTACCTATTAGAAGATGTGAAATTCCAGCTTGAAACAGCAGAGGCACATATT
CGTAAAGCGACTGAACTCGCAATGCTTCCTGACGGTCCGGTGCCCCGCGTTGAAACACTGCAAGCAGATGCAGTTTTACT
TGGAACGTTATCATCAGCAGCATGTGAATCGTGGACAAGCGTTTATGAAGCGATGCAAAATGTATCGTGGCAAACGTTAA
AGCGCATTAAGAAAAGTGATTACAACGAGGATGTTGTAAAACAAGTAGACTCTCTTCGTAATAAAGCGAAAGATGAAGTG
AAGAAATTACAAGAAGAGTTATTTAGCCGCAGACCCGAAAGTTTCTTACGAGATTTTCAAGATATGCATCCTGTATTAGA
AAAACTCGTACAGCTTGTAAAAGTATTTACAGGGCGTTTCCAAGCGATGAAGCGTGATAAAGGAATGGTTGATTTCACAG
ATTTAGAGCATTTCTGTCTACAAATTTTAAGTGAACAAAGTGAAAACGGTGAAATGAAGCCGTCAGCAGTAGCGCTTCAA
TATCGTAATAAATTTGCTGAAGTACTAGTCGATGAATATCAAGATACGAACTTTGTGCAGGAATCCATTATTAAATTCGT
AACGAAAGATTCTGAGAGTGAAGGGAACTTGTTCATGGTTGGCGACGTAAAACAGTCGATTTATCGTTTCCGACTAGCAG
AACCAGGCCTGTTTCTAGGAAAGTATAAACGCTTCACACAAGAAGGATCGGGCGGCGGAATGAAGATAGATTTAGCGAAA
AACTTCCGTAGCCGTCATGAAGTGTTAGCAGGTACGAACTTTATCTTCAAACAAATTATGGGCGAAGAAGTCGGAGAAAT
CGATTACGATGCTGACGCTGAATTAAAGTTAGGTGCTAGCTATCCAGATGGTGAAGATGTAGCGGCTGAACTACTATGTA
TTCAGCAAACAGAAGAAGAAGTGTTAGACGGTGAAGAAGGTGCGGAAGTAGAAAAAGCGCAACTTGAAGCTCGCCTTATG
GCGCAGCGCATTAAAGCGATGGTAGACTCAGGTTATGAAGTGTATGACCGTAAAAATGATAGTATGCGCCCTGTACAATA
CCGCGACTTCGTTATTTTACTTCGCTCCATGCCGTGGGCACCGCAAATTATGGAAGAGTTAAAGCTGCAAGGAATTCCAG
TATACGCTGATCTTGCGACTGGTTACTTTGAAGCGACAGAAGTAAATATTATGATGAACGTATTCCGCGTGATTGATAAT
CCGATGCAAGATATTCCACTTGCCGCCGTACTTCGTTCACCAATCGTTGGACTAAATGATGAAGAACTTGCAACATTGCG
TGCTCACGGAAAGAAAGGTTCGTTTTATGAAGTAATGAGCTCATTCTTAAAAGGGGCACCGCTTGAAGAAGAACAAGAAT
TACATGATAAATTACAGTGGTTTTATAACTTACTGCAAGGATGGCGTGAATTCGCGCGTCAACAGTCACTTTCTGATTTA
ATTTGGAAAGTGTACGGTGAGACAGGTTATTACGACTTTGTTGGCGGTTTACCAGCCGGAAAGCAAAGGCAAGCAAACCT
GCGTGTACTTTATGACCGTGCAAGGCAATATGAAGCAACATCGTTTAGAGGATTATTCCGCTTCTTACGCTTTATTGAAC
GTATTTTAGAACGCGGTGATGATATGGGAACGGCGAGAGCTTTAGGTGAACAAGAAGATGTCGTTCGTATTATGACGATT
CATAAAAGTAAAGGACTTGAGTTCCCAGTCGTATTTGTAGCGGGACTAGGTCGTCGTTTTAATACACAAGATTTAATGAA
ACGTTTCTTACTGCATAAAGACTTCGGTTTCGGTTCGCAATTTATCGATCCTCGTAAACGAATTAAATATACGACATTAT
CGCAACTAGCAATTAAGCGTAAAATGAAAATGGAATTAATCGCGGAAGAAATGCGCGTGTTATACGTAGCGTTAACGCGT
GCGAAAGAGAAGTTAATTTTAATTGGAACGGTTAAAGATGCCAATAAAGAAATGGAAAAATGGCTCGATGCAAGGGAGCA
TAGTGAATGGTTATTACCAGACCATATACGTGCCGGAGCGTCTTGTTATTTAGACTGGATTGCACCTTCATTATATAGAC
ATCGTGATAGTGAAATGCTACTTGAATTAGGACAAGGAAGCATTCCGGGTGAAATTTATGGATATGACACGAGCTGGAAA
GTAGAAGTTGTTGACGGCAAAACGTTATTTGCACCGGAACCGGTTCAAGAAGAAAAACAAGAATTGTTAGAAGCACTTCG
TGAGAAAAAAGCTGTTCCGCTACAAAGTGAACGGAAAGAAGAAGTGTATGACAGATTAATGTGGAAGTACGGATATGAGG
AAGCAACATCTCACCGTGCGAAACAGTCTGTGACAGAAATAAAGAGAAACTACCAATCAGAAGAAGGTAGCGATAATGCC
TTTATTAAAAAACTGCGTGCACCAATTAAAACGCGTCCTCGTTTTATGGAGAAAAAAGGATTAACGTATGCTGAAAGAGG
TACGGCAGTTCACGCTGTTATGCAGCATGTTGATTTGAAGAAGCCGATTACAGAAGAAGTGATTCGAGAGCAAATTGCCG
GAATGGTAAATAAGGAATTATTAACATTCGAACAAGCTGAAGAAGTAGCAATTGAAAAAGTGATTTCATTCTTTGACAGT
GACCTAGGTAAGAGGGTATTAGCAGCGAAAAGTGTTGAGCGTGAAGTACCATTTACAATGATGCTTGCAGCAGAAGAGGC
GTATCAAGATTGGCAAGGTAAGAGTGACGAAACGATACTTGTCCAAGGGGTTATCGACTGCATGATTGAAGAGGAAGATG
GTATCACTTTAATCGATTTTAAAACGGATACGATTGAAGGAAAGTTCCCAGGTGGATTCGATCAAGCAAAACCAATTTTA
GAAGATCGATACAAAGTGCAGCTTTCGTTATATGCAAAAGCACTTGAGAAAAGCTTACAACATCCTGTGAAAGAGAAATG
CTTATACTTCTTTGATGGTAATCATGTTGTTAAAATTGAAGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

53.087

100

0.533