Detailed information NTG0083581

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8570_RS10780
• Genome accession: NZ_AP026932
• Coordinates: 2122028..2123125 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701549
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2117028..2128125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8570_RS10755 (PC1528_21080)	pgsA	2117549..2118094 (-)	546	WP_050259915.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8570_RS10760 (PC1528_21090)	rodZ	2118105..2118926 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8570_RS10765 (PC1528_21100)	yfmH	2118968..2120251 (-)	1284	WP_317647402.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8570_RS10770 (PC1528_21110)	yfmF	2120248..2121498 (-)	1251	WP_050263805.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8570_RS10775 (PC1528_21120)	-	2121657..2122025 (+)	369	WP_050263804.1	RNA-binding S4 domain-containing protein	-
R8570_RS10780 (PC1528_21130)	recF	2122028..2123125 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
R8570_RS10785 (PC1528_21140)	guaB	2123176..2124654 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8570_RS10790 (PC1528_21150)	trpS	2124806..2125831 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8570_RS10795 (PC1528_21160)	-	2126037..2127659 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=83581 R8570_RS10780 WP_000266670.1 2122028..2123125(+) (recF) [Streptococcus pneumoniae strain PZ900701549]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=83581 R8570_RS10780 WP_000266670.1 2122028..2123125(+) (recF) [Streptococcus pneumoniae strain PZ900701549]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463