Detailed information NTG0835696

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QNK06_RS06085
• Genome accession: NZ_CP126097
• Coordinates: 1166290..1167243 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain KF24
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1161290..1172243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK06_RS06060 (QNK06_06060)	argF	1163122..1164081 (+)	960	WP_038828321.1	ornithine carbamoyltransferase	-
QNK06_RS06065 (QNK06_06065)	yjzC	1164167..1164346 (+)	180	WP_003245356.1	YjzC family protein	-
QNK06_RS06070 (QNK06_06070)	yjzD	1164393..1164578 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
QNK06_RS06075 (QNK06_06075)	-	1164827..1165561 (+)	735	WP_003245223.1	hypothetical protein	-
QNK06_RS06080 (QNK06_06080)	-	1165643..1166200 (+)	558	WP_128747034.1	hypothetical protein	-
QNK06_RS06085 (QNK06_06085)	med	1166290..1167243 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
QNK06_RS06090 (QNK06_06090)	comZ	1167258..1167449 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
QNK06_RS06095 (QNK06_06095)	yjzB	1167479..1167715 (-)	237	WP_072173825.1	spore coat protein YjzB	-
QNK06_RS06100 (QNK06_06100)	fabH	1167880..1168818 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
QNK06_RS06105 (QNK06_06105)	fabF	1168841..1170082 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
QNK06_RS06110 (QNK06_06110)	yjaZ	1170158..1170943 (+)	786	WP_032725393.1	DUF2268 domain-containing protein	-
QNK06_RS06115 (QNK06_06115)	appD	1171134..1172120 (+)	987	WP_283934237.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=835696 QNK06_RS06085 WP_014476425.1 1166290..1167243(+) (med) [Bacillus subtilis strain KF24]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=835696 QNK06_RS06085 WP_014476425.1 1166290..1167243(+) (med) [Bacillus subtilis strain KF24]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAACGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997