Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNK06_RS06090 Genome accession   NZ_CP126097
Coordinates   1167258..1167449 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain KF24     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162258..1172449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS06060 (QNK06_06060) argF 1163122..1164081 (+) 960 WP_038828321.1 ornithine carbamoyltransferase -
  QNK06_RS06065 (QNK06_06065) yjzC 1164167..1164346 (+) 180 WP_003245356.1 YjzC family protein -
  QNK06_RS06070 (QNK06_06070) yjzD 1164393..1164578 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  QNK06_RS06075 (QNK06_06075) - 1164827..1165561 (+) 735 WP_003245223.1 hypothetical protein -
  QNK06_RS06080 (QNK06_06080) - 1165643..1166200 (+) 558 WP_128747034.1 hypothetical protein -
  QNK06_RS06085 (QNK06_06085) med 1166290..1167243 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  QNK06_RS06090 (QNK06_06090) comZ 1167258..1167449 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QNK06_RS06095 (QNK06_06095) yjzB 1167479..1167715 (-) 237 WP_072173825.1 spore coat protein YjzB -
  QNK06_RS06100 (QNK06_06100) fabH 1167880..1168818 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QNK06_RS06105 (QNK06_06105) fabF 1168841..1170082 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  QNK06_RS06110 (QNK06_06110) yjaZ 1170158..1170943 (+) 786 WP_032725393.1 DUF2268 domain-containing protein -
  QNK06_RS06115 (QNK06_06115) appD 1171134..1172120 (+) 987 WP_283934237.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=835697 QNK06_RS06090 WP_003224559.1 1167258..1167449(+) (comZ) [Bacillus subtilis strain KF24]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=835697 QNK06_RS06090 WP_003224559.1 1167258..1167449(+) (comZ) [Bacillus subtilis strain KF24]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1