Detailed information NTG0835576

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNH31_RS19095
• Genome accession: NZ_CP126094
• Coordinates: 3711630..3712775 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain G2S2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3706630..3717775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH31_RS19075 (QNH31_19075)	albF	3706646..3707926 (+)	1281	WP_041850411.1	pitrilysin family protein	-
QNH31_RS19080 (QNH31_19080)	albG	3707923..3708624 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QNH31_RS19085 (QNH31_19085)	ywhL	3708630..3710006 (-)	1377	WP_041850409.1	YncE family protein	-
QNH31_RS19090 (QNH31_19090)	ywhK	3710045..3711400 (-)	1356	WP_041850408.1	YncE family protein	-
QNH31_RS21025	-	3711397..3711627 (-)	231	Protein_3699	hypothetical protein	-
QNH31_RS19095 (QNH31_19095)	rapF	3711630..3712775 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
QNH31_RS19100 (QNH31_19100)	phrF	3712759..3712878 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QNH31_RS19105 (QNH31_19105)	ywhH	3712976..3713449 (+)	474	Protein_3702	YbaK/EbsC family protein	-
QNH31_RS19110 (QNH31_19110)	speB	3713480..3714352 (-)	873	WP_003227545.1	agmatinase	-
QNH31_RS19115 (QNH31_19115)	speE	3714413..3715243 (-)	831	WP_003227543.1	spermidine synthase	-
QNH31_RS19120 (QNH31_19120)	pbpG	3715445..3717520 (+)	2076	WP_041850407.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=835576 QNH31_RS19095 WP_021480843.1 3711630..3712775(+) (rapF) [Bacillus subtilis strain G2S2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=835576 QNH31_RS19095 WP_021480843.1 3711630..3712775(+) (rapF) [Bacillus subtilis strain G2S2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572