Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QNH31_RS19100 Genome accession   NZ_CP126094
Coordinates   3712759..3712878 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain G2S2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3707759..3717878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS19080 (QNH31_19080) albG 3707923..3708624 (+) 702 WP_041850410.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  QNH31_RS19085 (QNH31_19085) ywhL 3708630..3710006 (-) 1377 WP_041850409.1 YncE family protein -
  QNH31_RS19090 (QNH31_19090) ywhK 3710045..3711400 (-) 1356 WP_041850408.1 YncE family protein -
  QNH31_RS21025 - 3711397..3711627 (-) 231 Protein_3699 hypothetical protein -
  QNH31_RS19095 (QNH31_19095) rapF 3711630..3712775 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  QNH31_RS19100 (QNH31_19100) phrF 3712759..3712878 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QNH31_RS19105 (QNH31_19105) ywhH 3712976..3713449 (+) 474 Protein_3702 YbaK/EbsC family protein -
  QNH31_RS19110 (QNH31_19110) speB 3713480..3714352 (-) 873 WP_003227545.1 agmatinase -
  QNH31_RS19115 (QNH31_19115) speE 3714413..3715243 (-) 831 WP_003227543.1 spermidine synthase -
  QNH31_RS19120 (QNH31_19120) pbpG 3715445..3717520 (+) 2076 WP_041850407.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=835577 QNH31_RS19100 WP_009968329.1 3712759..3712878(+) (phrF) [Bacillus subtilis strain G2S2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=835577 QNH31_RS19100 WP_009968329.1 3712759..3712878(+) (phrF) [Bacillus subtilis strain G2S2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487