Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH18_RS06520 Genome accession   NZ_CP126091
Coordinates   1307051..1307236 (+) Length   61 a.a.
NCBI ID   WP_219192765.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain CEW 1W     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1302051..1312236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH18_RS06490 (QNH18_06490) - 1302943..1303755 (-) 813 WP_065643386.1 undecaprenyl-diphosphate phosphatase -
  QNH18_RS06495 (QNH18_06495) - 1303937..1304116 (+) 180 WP_003180573.1 YjzC family protein -
  QNH18_RS06500 (QNH18_06500) - 1304180..1304374 (-) 195 WP_009328851.1 YjzD family protein -
  QNH18_RS06505 (QNH18_06505) - 1304606..1305340 (+) 735 WP_035338967.1 hypothetical protein -
  QNH18_RS06510 (QNH18_06510) - 1305426..1306001 (+) 576 WP_283931636.1 hypothetical protein -
  QNH18_RS06515 (QNH18_06515) med 1306087..1307040 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH18_RS06520 (QNH18_06520) comZ 1307051..1307236 (+) 186 WP_219192765.1 ComZ family protein Regulator
  QNH18_RS06525 (QNH18_06525) - 1307289..1307531 (-) 243 WP_003180586.1 hypothetical protein -
  QNH18_RS06530 (QNH18_06530) - 1307700..1308638 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  QNH18_RS06535 (QNH18_06535) fabF 1308660..1309898 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  QNH18_RS06540 (QNH18_06540) - 1309984..1310772 (+) 789 WP_219192763.1 DUF2268 domain-containing protein -
  QNH18_RS06545 (QNH18_06545) - 1310964..1311938 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6876.98 Da        Isoelectric Point: 4.2564

>NTDB_id=835344 QNH18_RS06520 WP_219192765.1 1307051..1307236(+) (comZ) [Bacillus paralicheniformis strain CEW 1W]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIEFSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=835344 QNH18_RS06520 WP_219192765.1 1307051..1307236(+) (comZ) [Bacillus paralicheniformis strain CEW 1W]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGCAGAGATGGAGAAAGCGGG
AATCGAATTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCCGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

71.667

98.361

0.705