Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   QNH18_RS06515 Genome accession   NZ_CP126091
Coordinates   1306087..1307040 (+) Length   317 a.a.
NCBI ID   WP_020450927.1    Uniprot ID   A0A6N2FML9
Organism   Bacillus paralicheniformis strain CEW 1W     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1301087..1312040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH18_RS06485 (QNH18_06485) argF 1301955..1302905 (+) 951 WP_035338970.1 ornithine carbamoyltransferase -
  QNH18_RS06490 (QNH18_06490) - 1302943..1303755 (-) 813 WP_065643386.1 undecaprenyl-diphosphate phosphatase -
  QNH18_RS06495 (QNH18_06495) - 1303937..1304116 (+) 180 WP_003180573.1 YjzC family protein -
  QNH18_RS06500 (QNH18_06500) - 1304180..1304374 (-) 195 WP_009328851.1 YjzD family protein -
  QNH18_RS06505 (QNH18_06505) - 1304606..1305340 (+) 735 WP_035338967.1 hypothetical protein -
  QNH18_RS06510 (QNH18_06510) - 1305426..1306001 (+) 576 WP_283931636.1 hypothetical protein -
  QNH18_RS06515 (QNH18_06515) med 1306087..1307040 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH18_RS06520 (QNH18_06520) comZ 1307051..1307236 (+) 186 WP_219192765.1 ComZ family protein Regulator
  QNH18_RS06525 (QNH18_06525) - 1307289..1307531 (-) 243 WP_003180586.1 hypothetical protein -
  QNH18_RS06530 (QNH18_06530) - 1307700..1308638 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  QNH18_RS06535 (QNH18_06535) fabF 1308660..1309898 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  QNH18_RS06540 (QNH18_06540) - 1309984..1310772 (+) 789 WP_219192763.1 DUF2268 domain-containing protein -
  QNH18_RS06545 (QNH18_06545) - 1310964..1311938 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35390.09 Da        Isoelectric Point: 4.7166

>NTDB_id=835343 QNH18_RS06515 WP_020450927.1 1306087..1307040(+) (med) [Bacillus paralicheniformis strain CEW 1W]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=835343 QNH18_RS06515 WP_020450927.1 1306087..1307040(+) (med) [Bacillus paralicheniformis strain CEW 1W]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATTTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N2FML9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675