Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QNH18_RS02045 Genome accession   NZ_CP126091
Coordinates   380691..381089 (-) Length   132 a.a.
NCBI ID   WP_059230704.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain CEW 1W     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 375691..386089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH18_RS02015 (QNH18_02015) - 375699..375860 (+) 162 WP_023855674.1 hypothetical protein -
  QNH18_RS02020 (QNH18_02020) - 376019..376702 (-) 684 WP_020450090.1 amino acid ABC transporter permease -
  QNH18_RS02025 (QNH18_02025) - 376714..377589 (-) 876 WP_059230708.1 transporter substrate-binding domain-containing protein -
  QNH18_RS02030 (QNH18_02030) - 377773..378324 (+) 552 WP_039073173.1 NAD(P)H-dependent oxidoreductase -
  QNH18_RS02035 (QNH18_02035) - 378420..379145 (+) 726 WP_020450093.1 AAA family ATPase -
  QNH18_RS02040 (QNH18_02040) - 379215..380651 (+) 1437 WP_059230706.1 family 1 glycosylhydrolase -
  QNH18_RS02045 (QNH18_02045) nin/comJ 380691..381089 (-) 399 WP_059230704.1 competence protein ComJ Regulator
  QNH18_RS02050 (QNH18_02050) nucA/comI 381107..381553 (-) 447 WP_020450096.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QNH18_RS02055 (QNH18_02055) - 381856..382026 (+) 171 WP_023855671.1 hypothetical protein -
  QNH18_RS02060 (QNH18_02060) - 382032..382835 (+) 804 WP_283931552.1 protein kinase -
  QNH18_RS02065 (QNH18_02065) - 383241..383981 (-) 741 WP_268509504.1 LXG domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14929.04 Da        Isoelectric Point: 5.6541

>NTDB_id=835331 QNH18_RS02045 WP_059230704.1 380691..381089(-) (nin/comJ) [Bacillus paralicheniformis strain CEW 1W]
MIKKWEAEEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTAGEHAVSFEALDNTASLVEVRLNVQEQVPSFNRRVTVSF
DVLHGGVEIASVLSKKLSCDIPQGVYQLTCYTIMPDKSSTAKITYILDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=835331 QNH18_RS02045 WP_059230704.1 380691..381089(-) (nin/comJ) [Bacillus paralicheniformis strain CEW 1W]
TTGATCAAAAAGTGGGAAGCAGAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAAAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGCTACACAGCGGGAGAACACGCGGTCTCGTTTGAAGCTCTCGATA
ATACGGCATCATTAGTAGAAGTTCGTTTGAATGTCCAGGAACAGGTTCCCTCCTTTAACAGGCGCGTCACCGTTTCTTTC
GACGTGCTTCATGGCGGGGTCGAAATTGCAAGCGTCCTATCCAAGAAATTGTCATGCGACATCCCGCAAGGCGTCTATCA
GCTGACATGCTATACGATTATGCCTGATAAAAGCAGCACTGCGAAGATCACCTATATTCTCGATTTTAAACAGGCCTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

51.562

96.97

0.5